Analysis of interatomic Contacts of Structural Units in PDB entry:
4EBV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EBV entry

There is 1 chain in PDB entry 4EBV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 410GLN 686
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4EBV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
412 416Right-handed 310
Helix 2
2
A
418 420Right-handed 310
Helix 3
3
A
461 477Right-handed alpha
Helix 4
4
A
506 514Right-handed alpha
Helix 5
5
A
519 540Right-handed alpha
Helix 6
6
A
546 550Right-handed 310
Helix 7
7
A
585 589Right-handed 310
Helix 8
8
A
590 597Right-handed alpha
Helix 9
9
A
600 617Right-handed alpha
Helix 10
10
A
627 629Right-handed 310
Helix 11
11
A
630 637Right-handed alpha
Helix 12
12
A
648 659Right-handed alpha
Helix 13
13
A
662 666Right-handed 310
Helix 14
14
A
668 685Right-handed alpha
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There are 2 sheets in PDB entry 4EBV. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
422 431first strand
Strand 2
A
434 441anti-parallel
Strand 3
A
449 455anti-parallel
Strand 4
A
496 500anti-parallel
Strand 5
A
486 490anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
551 556first strand
Strand 2
A
559 563anti-parallel
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