Analysis of interatomic Contacts of Structural Units in PDB entry:
4EDM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EDM entry

There are 2 chains in PDB entry 4EDM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 238GLU 364
B
 GLY 235GLU 364
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4EDM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
242 247Right-handed 310
Helix 2
2
A
253 269Right-handed alpha
Helix 3
3
A
270 272Right-handed 310
Helix 4
4
A
285 296Right-handed alpha
Helix 5
5
A
301 305Right-handed 310
Helix 6
6
A
311 329Right-handed alpha
Helix 7
7
A
337 343Right-handed alpha
Helix 8
8
A
345 361Right-handed alpha
Helix 9
9
B
240 249Right-handed alpha
Helix 10
10
B
251 269Right-handed alpha
Helix 11
11
B
270 272Right-handed 310
Helix 12
12
B
285 296Right-handed alpha
Helix 13
13
B
301 305Right-handed 310
Helix 14
14
B
311 330Right-handed alpha
Helix 15
15
B
337 343Right-handed alpha
Helix 16
16
B
345 361Right-handed alpha
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There are no sheets in PDB entry 4EDM
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il