Analysis of interatomic Contacts of Structural Units in PDB entry:
4EDN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EDN entry

There are 10 chains in PDB entry 4EDN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 238GLU 364
B
ARG 239GLU 364
C
GLU 238GLU 364
D
ASP 240GLU 364
E
GLU 238GLU 364
F
ASP 240GLU 364
G
ASP 240GLU 364
H
ASP 240GLU 364
I
ALA 241GLU 364
J
ASP 240LEU 327
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 90 helices in PDB entry 4EDN. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
240 249Right-handed alpha
Helix 2
2
A
252 269Right-handed alpha
Helix 3
3
A
270 272Right-handed 310
Helix 4
4
A
277 282Right-handed alpha
Helix 5
5
A
285 296Right-handed alpha
Helix 6
6
A
311 329Right-handed alpha
Helix 7
7
A
337 343Right-handed alpha
Helix 8
8
A
345 360Right-handed alpha
Helix 9
9
B
240 248Right-handed alpha
Helix 10
10
B
249 269Right-handed alpha
Helix 11
11
B
270 272Right-handed 310
Helix 12
12
B
285 297Right-handed alpha
Helix 13
13
B
301 305Right-handed 310
Helix 14
14
B
311 329Right-handed alpha
Helix 15
15
B
337 343Right-handed alpha
Helix 16
16
B
345 360Right-handed alpha
Helix 17
17
C
240 248Right-handed alpha
Helix 18
18
C
249 251Right-handed 310
Helix 19
19
C
252 269Right-handed alpha
Helix 20
20
C
270 272Right-handed 310
Helix 21
21
C
277 282Right-handed alpha
Helix 22
22
C
285 296Right-handed alpha
Helix 23
23
C
311 330Right-handed alpha
Helix 24
24
C
337 343Right-handed alpha
Helix 25
25
C
345 361Right-handed alpha
Helix 26
26
D
242 248Right-handed alpha
Helix 27
27
D
252 269Right-handed alpha
Helix 28
28
D
270 272Right-handed 310
Helix 29
29
D
285 296Right-handed alpha
Helix 30
30
D
311 330Right-handed alpha
Helix 31
31
D
337 343Right-handed alpha
Helix 32
32
D
345 360Right-handed alpha
Helix 33
33
E
240 248Right-handed alpha
Helix 34
34
E
249 251Right-handed 310
Helix 35
35
E
252 269Right-handed alpha
Helix 36
36
E
270 272Right-handed 310
Helix 37
37
E
277 282Right-handed alpha
Helix 38
38
E
285 296Right-handed alpha
Helix 39
39
E
301 305Right-handed 310
Helix 40
40
E
311 329Right-handed alpha
Helix 41
41
E
337 343Right-handed alpha
Helix 42
42
E
345 360Right-handed alpha
Helix 43
43
F
241 246Right-handed alpha
Helix 44
44
F
249 251Right-handed 310
Helix 45
45
F
252 269Right-handed alpha
Helix 46
46
F
270 272Right-handed 310
Helix 47
47
F
285 296Right-handed alpha
Helix 48
48
F
311 329Right-handed alpha
Helix 49
49
F
337 343Right-handed alpha
Helix 50
50
F
345 360Right-handed alpha
Helix 51
51
G
241 248Right-handed alpha
Helix 52
52
G
249 251Right-handed 310
Helix 53
53
G
252 269Right-handed alpha
Helix 54
54
G
270 272Right-handed 310
Helix 55
55
G
285 296Right-handed alpha
Helix 56
56
G
301 305Right-handed 310
Helix 57
57
G
311 329Right-handed alpha
Helix 58
58
G
337 343Right-handed alpha
Helix 59
59
G
345 360Right-handed alpha
Helix 60
60
H
241 248Right-handed alpha
Helix 61
61
H
252 269Right-handed alpha
Helix 62
62
H
270 272Right-handed 310
Helix 63
63
H
277 282Right-handed alpha
Helix 64
64
H
285 296Right-handed alpha
Helix 65
65
H
311 330Right-handed alpha
Helix 66
66
H
337 343Right-handed alpha
Helix 67
67
H
345 360Right-handed alpha
Helix 68
68
I
242 248Right-handed alpha
Helix 69
69
I
249 251Right-handed 310
Helix 70
70
I
252 269Right-handed alpha
Helix 71
71
I
270 272Right-handed 310
Helix 72
72
I
277 282Right-handed alpha
Helix 73
73
I
285 296Right-handed alpha
Helix 74
74
I
311 329Right-handed alpha
Helix 75
75
I
337 343Right-handed alpha
Helix 76
76
I
345 360Right-handed alpha
Helix 77
77
J
243 248Right-handed alpha
Helix 78
78
J
252 269Right-handed alpha
Helix 79
79
J
270 272Right-handed 310
Helix 80
80
J
285 296Right-handed alpha
Helix 81
81
J
311 329Right-handed alpha
Helix 82
82
J
337 343Right-handed alpha
Helix 83
83
J
345 360Right-handed alpha
Helix 84
84
K
3 12Right-handed alpha
Helix 85
85
L
4 8Right-handed 310
Helix 86
86
M
4 11Right-handed alpha
Helix 87
87
N
3 11Right-handed alpha
Helix 88
88
O
2 11Right-handed alpha
Helix 89
89
P
3 12Right-handed alpha
Helix 90
90
Q
2 12Right-handed alpha
Back to top of page
There are no sheets in PDB entry 4EDN

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il