Analysis of interatomic Contacts of Structural Units in PDB entry:
4EE8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EE8 entry

There is 1 chain in PDB entry 4EE8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3GLY 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4EE8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 21Right-handed alpha
Helix 2
2
A
26 37Right-handed alpha
Helix 3
3
A
37 42Right-handed alpha
Helix 4
4
A
53 58Right-handed 310
Helix 5
5
A
71 79Right-handed alpha
Helix 6
6
A
88 100Right-handed alpha
Helix 7
7
A
129 134Right-handed alpha
Helix 8
8
A
141 146Right-handed alpha
Helix 9
9
A
146 153Right-handed alpha
Helix 10
10
A
184 188Right-handed 310
Helix 11
11
A
189 200Right-handed alpha
Helix 12
12
A
206 214Right-handed alpha
Helix 13
13
A
241 245Right-handed 310
Helix 14
14
A
250 260Right-handed alpha
Helix 15
15
A
291 297Right-handed 310
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There is 1 sheet ( A) in PDB entry 4EE8.

There are 11 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 51first strand
Strand 2
A
60 66anti-parallel
Strand 3
A
102 110anti-parallel
Strand 4
A
114 122anti-parallel
Strand 5
A
159 165anti-parallel
Strand 6
A
170 175anti-parallel
Strand 7
A
218 224anti-parallel
Strand 8
A
232 239anti-parallel
Strand 9
A
269 275anti-parallel
Strand 10
A
280 289anti-parallel
Strand 11
A
45 51anti-parallel
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