Analysis of interatomic Contacts of Structural Units in PDB entry:
4EE9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EE9 entry

There is 1 chain in PDB entry 4EE9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1GLU 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 4EE9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 41Right-handed alpha
Helix 2
2
A
51 56Right-handed alpha
Helix 3
3
A
64 81Right-handed alpha
Helix 4
4
A
106 122Right-handed alpha
Helix 5
5
A
137 141Right-handed 310
Helix 6
6
A
143 159Right-handed alpha
Helix 7
7
A
168 173Right-handed alpha
Helix 8
8
A
176 181Right-handed alpha
Helix 9
9
A
182 185Right-handed 310
Helix 10
10
A
221 238Right-handed alpha
Helix 11
11
A
252 269Right-handed alpha
Helix 12
12
A
297 308Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4EE9. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 9first strand
Strand 2
A
45 50parallel
Strand 3
A
84 89parallel
Strand 4
A
127 131parallel
Strand 5
A
164 166parallel
Strand 6
A
194 199parallel
Strand 7
A
241 246parallel
Strand 8
A
273 278parallel
Strand 9
A
5 9parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 95first strand
Strand 2
A
98 99anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il