Analysis of interatomic Contacts of Structural Units in PDB entry:
4EEL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EEL entry

There is 1 chain in PDB entry 4EEL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3ALA 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4EEL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 34Right-handed alpha
Helix 2
2
A
40 49Right-handed alpha
Helix 3
3
A
52 65Right-handed alpha
Helix 4
4
A
71 85Right-handed alpha
Helix 5
5
A
92 104Right-handed alpha
Helix 6
6
A
114 125Right-handed alpha
Helix 7
7
A
127 132Right-handed alpha
Helix 8
8
A
137 142Right-handed 310
Helix 9
9
A
149 160Right-handed alpha
Helix 10
10
A
162 164Right-handed 310
Helix 11
11
A
172 183Right-handed alpha
Helix 12
12
A
199 207Right-handed alpha
Helix 13
13
A
214 225Right-handed alpha
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There are 2 sheets in PDB entry 4EEL. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
107 110parallel
Strand 3
A
8 12parallel
Strand 4
A
166 170parallel
Strand 5
A
185 189parallel
Strand 6
A
210 212parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 19first strand
Strand 2
A
88 89anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il