Analysis of interatomic Contacts of Structural Units in PDB entry:
4EGE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EGE entry

There is 1 chain in PDB entry 4EGE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 4VAL 374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 4EGE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 25Right-handed alpha
Helix 2
2
A
35 43Right-handed alpha
Helix 3
3
A
70 77Right-handed 310
Helix 4
4
A
95 104Right-handed alpha
Helix 5
5
A
118 130Right-handed alpha
Helix 6
6
A
136 145Right-handed alpha
Helix 7
7
A
148 173Right-handed alpha
Helix 8
8
A
178 193Right-handed alpha
Helix 9
9
A
207 211Right-handed 310
Helix 10
10
A
253 274Right-handed alpha
Helix 11
11
A
279 294Right-handed alpha
Helix 12
12
A
296 300Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 4EGE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 90first strand
Strand 2
A
64 68parallel
Strand 3
A
54 58anti-parallel
Strand 4
A
29 32anti-parallel
Strand 5
A
111 113parallel
Strand 6
A
134 135parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 205first strand
Strand 2
A
226 235anti-parallel
Strand 3
A
239 240anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 205first strand
Strand 2
A
226 235anti-parallel
Strand 3
A
243 249anti-parallel
Strand 4
A
370 372parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 307first strand
Strand 2
A
314 318anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 334first strand
Strand 2
A
350 355anti-parallel
Strand 3
A
358 361anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 340first strand
Strand 2
A
344 347anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il