Analysis of interatomic Contacts of Structural Units in PDB entry:
4EGF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EGF entry

There are 6 chains in PDB entry 4EGF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 6GLY 262
B
 ASP 6GLY 262
C
 ASP 6GLY 262
D
 ASP 6GLY 262
E
 ASP 6GLY 262
F
 ASP 6ALA 142
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are112 helices in PDB entry 4EGF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 13Right-handed 310
Helix 2
2
A
26 39Right-handed alpha
Helix 3
3
A
49 65Right-handed alpha
Helix 4
4
A
79 93Right-handed alpha
Helix 5
5
A
109 113Right-handed 310
Helix 6
6
A
114 126Right-handed alpha
Helix 7
7
A
126 144Right-handed alpha
Helix 8
8
A
154 158Right-handed 310
Helix 9
9
A
164 186Right-handed alpha
Helix 10
10
A
202 209Right-handed alpha
Helix 11
11
A
211 220Right-handed alpha
Helix 12
12
A
229 242Right-handed alpha
Helix 13
13
A
243 246Right-handed 310
Helix 14
14
A
258 262Right-handed 310
Helix 15
15
B
9 13Right-handed 310
Helix 16
16
B
26 39Right-handed alpha
Helix 17
17
B
49 65Right-handed alpha
Helix 18
18
B
79 93Right-handed alpha
Helix 19
19
B
109 113Right-handed 310
Helix 20
20
B
114 126Right-handed alpha
Helix 21
21
B
126 144Right-handed alpha
Helix 22
22
B
154 158Right-handed 310
Helix 23
23
B
164 186Right-handed alpha
Helix 24
24
B
202 210Right-handed alpha
Helix 25
25
B
211 220Right-handed alpha
Helix 26
26
B
229 242Right-handed alpha
Helix 27
27
B
243 246Right-handed 310
Helix 28
28
B
258 262Right-handed 310
Helix 29
29
C
9 13Right-handed 310
Helix 30
30
C
26 39Right-handed alpha
Helix 31
31
C
49 65Right-handed alpha
Helix 32
32
C
79 92Right-handed alpha
Helix 33
33
C
109 113Right-handed 310
Helix 34
34
C
114 126Right-handed alpha
Helix 35
35
C
126 144Right-handed alpha
Helix 36
36
C
154 158Right-handed 310
Helix 37
37
C
164 186Right-handed alpha
Helix 38
38
C
202 210Right-handed alpha
Helix 39
39
C
215 221Right-handed alpha
Helix 40
40
C
229 242Right-handed alpha
Helix 41
41
C
243 246Right-handed 310
Helix 42
42
C
258 262Right-handed 310
Helix 43
43
D
9 13Right-handed 310
Helix 44
44
D
26 39Right-handed alpha
Helix 45
45
D
49 65Right-handed alpha
Helix 46
46
D
79 93Right-handed alpha
Helix 47
47
D
109 113Right-handed 310
Helix 48
48
D
114 126Right-handed alpha
Helix 49
49
D
126 144Right-handed alpha
Helix 50
50
D
154 158Right-handed 310
Helix 51
51
D
164 186Right-handed alpha
Helix 52
52
D
202 209Right-handed alpha
Helix 53
53
D
215 221Right-handed alpha
Helix 54
54
D
229 242Right-handed alpha
Helix 55
55
D
243 246Right-handed 310
Helix 56
56
D
258 262Right-handed 310
Helix 57
57
E
9 13Right-handed 310
Helix 58
58
E
26 39Right-handed alpha
Helix 59
59
E
49 65Right-handed alpha
Helix 60
60
E
79 93Right-handed alpha
Helix 61
61
E
109 113Right-handed 310
Helix 62
62
E
114 126Right-handed alpha
Helix 63
63
E
126 144Right-handed alpha
Helix 64
64
E
154 158Right-handed 310
Helix 65
65
E
164 186Right-handed alpha
Helix 66
66
E
202 210Right-handed alpha
Helix 67
67
E
211 221Right-handed alpha
Helix 68
68
E
229 242Right-handed alpha
Helix 69
69
E
243 246Right-handed 310
Helix 70
70
E
258 262Right-handed 310
Helix 71
71
F
9 13Right-handed 310
Helix 72
72
F
26 39Right-handed alpha
Helix 73
73
F
49 65Right-handed alpha
Helix 74
74
F
79 92Right-handed alpha
Helix 75
75
F
109 113Right-handed 310
Helix 76
76
F
114 126Right-handed alpha
Helix 77
77
F
126 144Right-handed alpha
Helix 78
78
F
154 159Right-handed alpha
Helix 79
79
F
164 186Right-handed alpha
Helix 80
80
F
202 209Right-handed alpha
Helix 81
81
F
211 221Right-handed alpha
Helix 82
82
F
229 242Right-handed alpha
Helix 83
83
F
243 246Right-handed 310
Helix 84
84
F
258 262Right-handed 310
Helix 85
85
G
9 13Right-handed 310
Helix 86
86
G
26 39Right-handed alpha
Helix 87
87
G
49 65Right-handed alpha
Helix 88
88
G
79 93Right-handed alpha
Helix 89
89
G
109 113Right-handed 310
Helix 90
90
G
114 126Right-handed alpha
Helix 91
91
G
126 144Right-handed alpha
Helix 92
92
G
154 158Right-handed 310
Helix 93
93
G
164 186Right-handed alpha
Helix 94
94
G
202 209Right-handed alpha
Helix 95
95
G
215 221Right-handed alpha
Helix 96
96
G
229 242Right-handed alpha
Helix 97
97
G
243 246Right-handed 310
Helix 98
98
G
258 262Right-handed 310
Helix 99
99
H
9 13Right-handed 310
Helix 100
100
H
26 39Right-handed alpha
Helix 101
101
H
49 65Right-handed alpha
Helix 102
102
H
79 92Right-handed alpha
Helix 103
103
H
109 113Right-handed 310
Helix 104
104
H
114 126Right-handed alpha
Helix 105
105
H
126 144Right-handed alpha
Helix 106
106
H
154 158Right-handed 310
Helix 107
107
H
164 186Right-handed alpha
Helix 108
108
H
202 210Right-handed alpha
Helix 109
109
H
211 221Right-handed alpha
Helix 110
110
H
229 242Right-handed alpha
Helix 111
111
H
243 246Right-handed 310
Helix 112
112
H
258 262Right-handed 310
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There are 8 sheets in PDB entry 4EGF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 72first strand
Strand 2
A
42 47parallel
Strand 3
A
18 21parallel
Strand 4
A
97 101parallel
Strand 5
A
147 152parallel
Strand 6
A
190 197parallel
Strand 7
A
252 255parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 72first strand
Strand 2
B
42 47parallel
Strand 3
B
18 21parallel
Strand 4
B
97 100parallel
Strand 5
B
147 152parallel
Strand 6
B
190 197parallel
Strand 7
B
252 255parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
68 72first strand
Strand 2
C
42 47parallel
Strand 3
C
18 21parallel
Strand 4
C
97 101parallel
Strand 5
C
147 152parallel
Strand 6
C
190 197parallel
Strand 7
C
252 255parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
68 72first strand
Strand 2
D
42 47parallel
Strand 3
D
18 21parallel
Strand 4
D
97 101parallel
Strand 5
D
147 152parallel
Strand 6
D
190 197parallel
Strand 7
D
252 255parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
68 72first strand
Strand 2
E
42 47parallel
Strand 3
E
18 21parallel
Strand 4
E
97 101parallel
Strand 5
E
147 152parallel
Strand 6
E
190 197parallel
Strand 7
E
252 255parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
68 72first strand
Strand 2
F
42 47parallel
Strand 3
F
18 21parallel
Strand 4
F
97 101parallel
Strand 5
F
147 152parallel
Strand 6
F
190 197parallel
Strand 7
F
252 255parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
68 72first strand
Strand 2
G
42 47parallel
Strand 3
G
18 21parallel
Strand 4
G
97 101parallel
Strand 5
G
147 152parallel
Strand 6
G
190 197parallel
Strand 7
G
252 255parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
68 72first strand
Strand 2
H
42 47parallel
Strand 3
H
18 21parallel
Strand 4
H
97 100parallel
Strand 5
H
147 152parallel
Strand 6
H
190 197parallel
Strand 7
H
252 255parallel
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