Analysis of interatomic Contacts of Structural Units in PDB entry:
4EGR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EGR entry

There are 6 chains in PDB entry 4EGR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN -1GLY 436
B
ASN -1GLY 436
C
ASN -1GLY 436
D
ASN -1GLY 436
E
ASN -1GLY 436
F
ASN -1GLY 436
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are109 helices in PDB entry 4EGR. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
20 33Right-handed alpha
Helix 2
2
A
46 59Right-handed alpha
Helix 3
3
A
67 70Right-handed 310
Helix 4
4
A
94 107Right-handed alpha
Helix 5
5
A
119 123Right-handed 310
Helix 6
6
A
125 135Right-handed alpha
Helix 7
7
A
167 180Right-handed alpha
Helix 8
8
A
195 204Right-handed alpha
Helix 9
9
A
233 247Right-handed alpha
Helix 10
10
A
260 263Right-handed 310
Helix 11
11
A
264 273Right-handed alpha
Helix 12
12
A
306 315Right-handed 310
Helix 13
13
A
316 326Right-handed alpha
Helix 14
14
A
336 342Right-handed 310
Helix 15
15
A
345 357Right-handed alpha
Helix 16
16
A
385 399Right-handed alpha
Helix 17
17
A
408 414Right-handed 310
Helix 18
18
A
417 425Right-handed alpha
Helix 19
19
B
20 34Right-handed alpha
Helix 20
20
B
46 59Right-handed alpha
Helix 21
21
B
67 70Right-handed 310
Helix 22
22
B
94 107Right-handed alpha
Helix 23
23
B
119 123Right-handed 310
Helix 24
24
B
125 135Right-handed alpha
Helix 25
25
B
167 180Right-handed alpha
Helix 26
26
B
195 204Right-handed alpha
Helix 27
27
B
233 247Right-handed alpha
Helix 28
28
B
260 263Right-handed 310
Helix 29
29
B
264 273Right-handed alpha
Helix 30
30
B
306 315Right-handed 310
Helix 31
31
B
316 326Right-handed alpha
Helix 32
32
B
336 342Right-handed 310
Helix 33
33
B
345 357Right-handed alpha
Helix 34
34
B
385 397Right-handed alpha
Helix 35
35
B
408 414Right-handed 310
Helix 36
36
B
417 425Right-handed alpha
Helix 37
37
C
20 34Right-handed alpha
Helix 38
38
C
46 59Right-handed alpha
Helix 39
39
C
67 70Right-handed 310
Helix 40
40
C
94 107Right-handed alpha
Helix 41
41
C
119 123Right-handed 310
Helix 42
42
C
125 135Right-handed alpha
Helix 43
43
C
167 179Right-handed alpha
Helix 44
44
C
195 204Right-handed alpha
Helix 45
45
C
233 247Right-handed alpha
Helix 46
46
C
260 263Right-handed 310
Helix 47
47
C
264 273Right-handed alpha
Helix 48
48
C
306 315Right-handed 310
Helix 49
49
C
316 326Right-handed alpha
Helix 50
50
C
336 342Right-handed 310
Helix 51
51
C
345 357Right-handed alpha
Helix 52
52
C
385 397Right-handed alpha
Helix 53
53
C
408 414Right-handed 310
Helix 54
54
C
417 425Right-handed alpha
Helix 55
55
D
20 33Right-handed alpha
Helix 56
56
D
46 59Right-handed alpha
Helix 57
57
D
67 70Right-handed 310
Helix 58
58
D
94 107Right-handed alpha
Helix 59
59
D
119 123Right-handed 310
Helix 60
60
D
125 135Right-handed alpha
Helix 61
61
D
167 180Right-handed alpha
Helix 62
62
D
195 204Right-handed alpha
Helix 63
63
D
233 247Right-handed alpha
Helix 64
64
D
260 263Right-handed 310
Helix 65
65
D
264 273Right-handed alpha
Helix 66
66
D
306 315Right-handed 310
Helix 67
67
D
316 326Right-handed alpha
Helix 68
68
D
336 342Right-handed 310
Helix 69
69
D
345 357Right-handed alpha
Helix 70
70
D
385 396Right-handed alpha
Helix 71
71
D
408 414Right-handed 310
Helix 72
72
D
417 425Right-handed alpha
Helix 73
73
E
20 34Right-handed alpha
Helix 74
74
E
46 59Right-handed alpha
Helix 75
75
E
67 70Right-handed 310
Helix 76
76
E
94 107Right-handed alpha
Helix 77
77
E
119 123Right-handed 310
Helix 78
78
E
125 135Right-handed alpha
Helix 79
79
E
167 180Right-handed alpha
Helix 80
80
E
195 204Right-handed alpha
Helix 81
81
E
233 247Right-handed alpha
Helix 82
82
E
260 263Right-handed 310
Helix 83
83
E
264 273Right-handed alpha
Helix 84
84
E
306 315Right-handed 310
Helix 85
85
E
316 326Right-handed alpha
Helix 86
86
E
336 342Right-handed 310
Helix 87
87
E
345 357Right-handed alpha
Helix 88
88
E
385 397Right-handed alpha
Helix 89
89
E
408 414Right-handed 310
Helix 90
90
E
417 425Right-handed alpha
Helix 91
91
F
20 34Right-handed alpha
Helix 92
92
F
46 59Right-handed alpha
Helix 93
93
F
67 70Right-handed 310
Helix 94
94
F
94 107Right-handed alpha
Helix 95
95
F
119 123Right-handed 310
Helix 96
96
F
125 135Right-handed alpha
Helix 97
97
F
141 145Right-handed 310
Helix 98
98
F
167 180Right-handed alpha
Helix 99
99
F
195 204Right-handed alpha
Helix 100
100
F
233 247Right-handed alpha
Helix 101
101
F
260 263Right-handed 310
Helix 102
102
F
264 273Right-handed alpha
Helix 103
103
F
306 315Right-handed 310
Helix 104
104
F
316 326Right-handed alpha
Helix 105
105
F
336 342Right-handed 310
Helix 106
106
F
345 357Right-handed alpha
Helix 107
107
F
385 396Right-handed alpha
Helix 108
108
F
408 414Right-handed 310
Helix 109
109
F
417 425Right-handed alpha
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There are 36 sheets in PDB entry 4EGR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
378 381first strand
Strand 2
A
403 406parallel
Strand 3
A
1 5anti-parallel
Strand 4
A
429 433anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
12 15first strand
Strand 2
A
251 258parallel
Strand 3
A
290 296anti-parallel
Strand 4
A
276 283anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
62 66first strand
Strand 2
A
71 75anti-parallel
Strand 3
A
37 41anti-parallel
Strand 4
A
228 229parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
89 90first strand
Strand 2
A
111 115parallel
Strand 3
A
148 151anti-parallel
Strand 4
A
138 140anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
160 162first strand
Strand 2
A
184 188parallel
Strand 3
A
214 218anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
330 333first strand
Strand 2
A
367 371anti-parallel
Strand 3
A
360 364anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
378 381first strand
Strand 2
B
403 406parallel
Strand 3
B
1 6anti-parallel
Strand 4
B
428 433anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
12 15first strand
Strand 2
B
251 258parallel
Strand 3
B
290 296anti-parallel
Strand 4
B
276 283anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
62 66first strand
Strand 2
B
71 75anti-parallel
Strand 3
B
37 41anti-parallel
Strand 4
B
228 229parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
89 90first strand
Strand 2
B
111 115parallel
Strand 3
B
148 151anti-parallel
Strand 4
B
138 140anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
160 162first strand
Strand 2
B
184 188parallel
Strand 3
B
214 218anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
330 333first strand
Strand 2
B
367 371anti-parallel
Strand 3
B
360 364anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
378 381first strand
Strand 2
C
403 406parallel
Strand 3
C
1 6anti-parallel
Strand 4
C
428 433anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
12 15first strand
Strand 2
C
251 258parallel
Strand 3
C
290 296anti-parallel
Strand 4
C
276 283anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
62 66first strand
Strand 2
C
71 75anti-parallel
Strand 3
C
37 41anti-parallel
Strand 4
C
228 229parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
89 90first strand
Strand 2
C
111 115parallel
Strand 3
C
148 151anti-parallel
Strand 4
C
138 140anti-parallel
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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
160 162first strand
Strand 2
C
184 188parallel
Strand 3
C
214 218anti-parallel
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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
330 333first strand
Strand 2
C
367 371anti-parallel
Strand 3
C
360 364anti-parallel
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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
378 381first strand
Strand 2
D
403 406parallel
Strand 3
D
1 6anti-parallel
Strand 4
D
428 433anti-parallel
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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
12 15first strand
Strand 2
D
251 258parallel
Strand 3
D
290 296anti-parallel
Strand 4
D
276 283anti-parallel
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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
62 66first strand
Strand 2
D
71 75anti-parallel
Strand 3
D
37 41anti-parallel
Strand 4
D
228 229parallel
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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
89 90first strand
Strand 2
D
111 115parallel
Strand 3
D
148 151anti-parallel
Strand 4
D
138 140anti-parallel
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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
160 162first strand
Strand 2
D
184 188parallel
Strand 3
D
214 218anti-parallel
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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
330 333first strand
Strand 2
D
367 371anti-parallel
Strand 3
D
360 364anti-parallel
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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
378 381first strand
Strand 2
E
403 406parallel
Strand 3
E
1 6anti-parallel
Strand 4
E
428 433anti-parallel
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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
12 15first strand
Strand 2
E
251 258parallel
Strand 3
E
290 296anti-parallel
Strand 4
E
276 283anti-parallel
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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
62 66first strand
Strand 2
E
71 75anti-parallel
Strand 3
E
37 41anti-parallel
Strand 4
E
228 229parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
89 90first strand
Strand 2
E
111 115parallel
Strand 3
E
148 151anti-parallel
Strand 4
E
138 140anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
160 162first strand
Strand 2
E
184 188parallel
Strand 3
E
214 218anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
330 333first strand
Strand 2
E
367 371anti-parallel
Strand 3
E
360 364anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
378 381first strand
Strand 2
F
403 406parallel
Strand 3
F
1 5anti-parallel
Strand 4
F
429 433anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
12 16first strand
Strand 2
F
251 258parallel
Strand 3
F
290 296anti-parallel
Strand 4
F
276 283anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
62 66first strand
Strand 2
F
71 75anti-parallel
Strand 3
F
37 41anti-parallel
Strand 4
F
228 229parallel
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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
89 90first strand
Strand 2
F
111 115parallel
Strand 3
F
148 151anti-parallel
Strand 4
F
138 140anti-parallel
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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
160 162first strand
Strand 2
F
184 188parallel
Strand 3
F
214 218anti-parallel
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There are 3 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
330 333first strand
Strand 2
F
367 371anti-parallel
Strand 3
F
360 364anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il