Analysis of interatomic Contacts of Structural Units in PDB entry:
4EIV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EIV entry

There are 2 chains in PDB entry 4EIV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 0VAL 278
B
THR 0ASP 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 4EIV. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
0 17Right-handed alpha
Helix 2
2
A
29 42Right-handed alpha
Helix 3
3
A
55 62Right-handed alpha
Helix 4
4
A
63 66Right-handed 310
Helix 5
5
A
67 73Right-handed 310
Helix 6
6
A
87 101Right-handed alpha
Helix 7
7
A
112 118Right-handed alpha
Helix 8
8
A
118 138Right-handed alpha
Helix 9
9
A
153 168Right-handed alpha
Helix 10
10
A
184 200Right-handed alpha
Helix 11
11
A
231 247Right-handed alpha
Helix 12
12
A
248 251Right-handed 310
Helix 13
13
A
261 274Right-handed alpha
Helix 14
14
B
6 18Right-handed alpha
Helix 15
15
B
29 42Right-handed alpha
Helix 16
16
B
52 54Right-handed 310
Helix 17
17
B
55 62Right-handed alpha
Helix 18
18
B
62 67Right-handed alpha
Helix 19
19
B
68 73Right-handed 310
Helix 20
20
B
87 101Right-handed alpha
Helix 21
21
B
111 117Right-handed 310
Helix 22
22
B
118 138Right-handed alpha
Helix 23
23
B
153 167Right-handed alpha
Helix 24
24
B
184 202Right-handed alpha
Helix 25
25
B
231 247Right-handed alpha
Helix 26
26
B
248 251Right-handed 310
Helix 27
27
B
261 274Right-handed alpha
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There are 2 sheets in PDB entry 4EIV. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
19 23first strand
Strand 2
A
48 51parallel
Strand 3
A
74 79parallel
Strand 4
A
105 109parallel
Strand 5
A
141 145parallel
Strand 6
A
171 173parallel
Strand 7
A
222 226parallel
Strand 8
A
256 260parallel
Strand 9
A
19 23parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
19 22first strand
Strand 2
B
48 51parallel
Strand 3
B
74 79parallel
Strand 4
B
105 109parallel
Strand 5
B
141 145parallel
Strand 6
B
171 173parallel
Strand 7
B
222 226parallel
Strand 8
B
256 260parallel
Strand 9
B
19 22parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il