Analysis of interatomic Contacts of Structural Units in PDB entry:
4EMV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EMV entry

There is 1 chain in PDB entry 4EMV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 17ASN 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 4EMV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 28Right-handed alpha
Helix 2
2
A
28 34Right-handed alpha
Helix 3
3
A
37 58Right-handed alpha
Helix 4
4
A
88 92Right-handed 310
Helix 5
5
A
93 101Right-handed alpha
Helix 6
6
A
118 122Right-handed 310
Helix 7
7
A
123 130Right-handed alpha
Helix 8
8
A
189 205Right-handed alpha
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There are 2 sheets in PDB entry 4EMV. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 155first strand
Strand 2
A
143 150anti-parallel
Strand 3
A
160 164anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 155first strand
Strand 2
A
143 150anti-parallel
Strand 3
A
131 140anti-parallel
Strand 4
A
171 178anti-parallel
Strand 5
A
74 78anti-parallel
Strand 6
A
63 68anti-parallel
Strand 7
A
208 213parallel
Strand 8
A
219 222anti-parallel
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