Analysis of interatomic Contacts of Structural Units in PDB entry:
4EOG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EOG entry

There is 1 chain in PDB entry 4EOG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 3GLU 480
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 4EOG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 16Right-handed 310
Helix 2
2
A
33 42Right-handed alpha
Helix 3
3
A
53 55Right-handed 310
Helix 4
4
A
74 93Right-handed alpha
Helix 5
5
A
95 101Right-handed 310
Helix 6
6
A
102 115Right-handed alpha
Helix 7
7
A
138 153Right-handed alpha
Helix 8
8
A
171 188Right-handed alpha
Helix 9
9
A
208 214Right-handed alpha
Helix 10
10
A
239 252Right-handed alpha
Helix 11
11
A
253 260Right-handed alpha
Helix 12
12
A
263 280Right-handed alpha
Helix 13
13
A
301 318Right-handed alpha
Helix 14
14
A
331 339Right-handed alpha
Helix 15
15
A
340 343Right-handed 310
Helix 16
16
A
344 363Right-handed alpha
Helix 17
17
A
378 385Right-handed alpha
Helix 18
18
A
390 399Right-handed alpha
Helix 19
19
A
404 410Right-handed alpha
Helix 20
20
A
428 436Right-handed alpha
Helix 21
21
A
461 475Right-handed alpha
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There are 5 sheets in PDB entry 4EOG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
19 23anti-parallel
Strand 3
A
216 221parallel
Strand 4
A
193 200anti-parallel
Strand 5
A
159 167parallel
Strand 6
A
4 10parallel
Strand 7
A
45 51parallel
Strand 8
A
118 123parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
19 23anti-parallel
Strand 3
A
216 221parallel
Strand 4
A
193 200anti-parallel
Strand 5
A
225 226anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 128first strand
Strand 2
A
133 135anti-parallel
Strand 3
A
292 296parallel
Strand 4
A
282 286anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 330first strand
Strand 2
A
454 459anti-parallel
Strand 3
A
444 449anti-parallel
Strand 4
A
402 403anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 369first strand
Strand 2
A
372 377anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il