Analysis of interatomic Contacts of Structural Units in PDB entry:
4EQF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EQF entry

There are 2 chains in PDB entry 4EQF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 7ASP 318
B
 ARG 2LEU 7
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4EQF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 33Right-handed alpha
Helix 2
2
A
34 49Right-handed alpha
Helix 3
3
A
52 66Right-handed alpha
Helix 4
4
A
68 83Right-handed alpha
Helix 5
5
A
86 100Right-handed alpha
Helix 6
6
A
102 117Right-handed alpha
Helix 7
7
A
117 122Right-handed alpha
Helix 8
8
A
144 161Right-handed alpha
Helix 9
9
A
166 181Right-handed alpha
Helix 10
10
A
182 197Right-handed alpha
Helix 11
11
A
200 214Right-handed alpha
Helix 12
12
A
216 231Right-handed alpha
Helix 13
13
A
234 249Right-handed alpha
Helix 14
14
A
251 267Right-handed alpha
Helix 15
15
A
281 295Right-handed alpha
Helix 16
16
A
296 305Right-handed alpha
Helix 17
17
A
308 312Right-handed 310
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There are no sheets in PDB entry 4EQF
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il