Analysis of interatomic Contacts of Structural Units in PDB entry:
4EY0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4EY0 entry

There are 8 chains in PDB entry 4EY0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 547	PHE 782
A	VAL 784	MET 789
B	ASN 547	PHE 782
B	VAL 784	MET 789
C	ASN 547	PHE 782
C	VAL 784	MET 789
D	ASN 547	PHE 782
D	VAL 784	MET 789

There are 24 helices in PDB entry 4EY0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	560	577	Right-handed alpha
Helix 2	2	A	631	642	Right-handed alpha
Helix 3	3	A	661	666	Right-handed 310
Helix 4	4	A	674	685	Right-handed alpha
Helix 5	5	A	733	744	Right-handed alpha
Helix 6	6	A	757	763	Right-handed alpha
Helix 7	7	B	560	577	Right-handed alpha
Helix 8	8	B	631	642	Right-handed alpha
Helix 9	9	B	661	666	Right-handed 310
Helix 10	10	B	674	685	Right-handed alpha
Helix 11	11	B	733	744	Right-handed alpha
Helix 12	12	B	757	763	Right-handed alpha
Helix 13	13	C	560	577	Right-handed alpha
Helix 14	14	C	631	642	Right-handed alpha
Helix 15	15	C	661	666	Right-handed 310
Helix 16	16	C	674	685	Right-handed alpha
Helix 17	17	C	733	744	Right-handed alpha
Helix 18	18	C	757	763	Right-handed alpha
Helix 19	19	D	560	577	Right-handed alpha
Helix 20	20	D	631	642	Right-handed alpha
Helix 21	21	D	661	666	Right-handed 310
Helix 22	22	D	674	685	Right-handed alpha
Helix 23	23	D	733	744	Right-handed alpha
Helix 24	24	D	757	763	Right-handed alpha

There are 16 sheets in PDB entry 4EY0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	551	553	first strand
Strand 2	A	583	587	parallel
Strand 3	A	595	601	anti-parallel
Strand 4	A	604	614	anti-parallel
Strand 5	A	619	624	anti-parallel
Strand 6	A	627	629	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	644	646	first strand
Strand 2	A	649	651	anti-parallel

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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	669	670	first strand
Strand 2	A	690	695	parallel
Strand 3	A	701	708	anti-parallel
Strand 4	A	711	720	anti-parallel
Strand 5	A	723	726	anti-parallel
Strand 6	A	729	731	anti-parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	669	670	first strand
Strand 2	A	690	695	parallel
Strand 3	A	754	755	parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	583	587	first strand
Strand 2	B	595	601	anti-parallel
Strand 3	B	604	614	anti-parallel
Strand 4	B	619	624	anti-parallel
Strand 5	B	627	629	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	644	646	first strand
Strand 2	B	649	651	anti-parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	669	670	first strand
Strand 2	B	690	695	parallel
Strand 3	B	701	708	anti-parallel
Strand 4	B	711	720	anti-parallel
Strand 5	B	723	726	anti-parallel
Strand 6	B	729	731	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	669	670	first strand
Strand 2	B	690	695	parallel
Strand 3	B	754	755	parallel

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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	583	587	first strand
Strand 2	C	595	601	anti-parallel
Strand 3	C	604	614	anti-parallel
Strand 4	C	619	624	anti-parallel
Strand 5	C	627	629	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	644	646	first strand
Strand 2	C	649	651	anti-parallel

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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	669	670	first strand
Strand 2	C	690	695	parallel
Strand 3	C	701	708	anti-parallel
Strand 4	C	711	720	anti-parallel
Strand 5	C	723	726	anti-parallel
Strand 6	C	729	731	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	669	670	first strand
Strand 2	C	690	695	parallel
Strand 3	C	754	755	parallel

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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	583	587	first strand
Strand 2	D	595	601	anti-parallel
Strand 3	D	604	614	anti-parallel
Strand 4	D	619	624	anti-parallel
Strand 5	D	627	629	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	644	646	first strand
Strand 2	D	649	651	anti-parallel

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There are 6 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	669	670	first strand
Strand 2	D	690	695	parallel
Strand 3	D	701	708	anti-parallel
Strand 4	D	711	720	anti-parallel
Strand 5	D	723	726	anti-parallel
Strand 6	D	729	731	anti-parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	669	670	first strand
Strand 2	D	690	695	parallel
Strand 3	D	754	755	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4EY0

Analysis of interatomic Contacts of Structural Units in PDB entry:
4EY0