Analysis of interatomic Contacts of Structural Units in PDB entry:
4EYT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EYT entry

There are 6 chains in PDB entry 4EYT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 376ASN 519
B
 ASN 378LYS 523
C
 GLN 377ARG 522
D
 ASN 378PHE 524
E
 ASN 378ARG 522
F
 ASN 378ARG 522
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 4EYT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
391 401Right-handed alpha
Helix 2
2
A
468 479Right-handed alpha
Helix 3
3
A
503 518Right-handed alpha
Helix 4
4
B
391 400Right-handed alpha
Helix 5
5
B
401 403Right-handed 310
Helix 6
6
B
468 483Right-handed alpha
Helix 7
7
B
503 518Right-handed alpha
Helix 8
8
C
391 401Right-handed alpha
Helix 9
9
C
468 482Right-handed alpha
Helix 10
10
C
503 519Right-handed alpha
Helix 11
11
D
391 401Right-handed alpha
Helix 12
12
D
468 480Right-handed alpha
Helix 13
13
D
503 518Right-handed alpha
Helix 14
14
E
391 401Right-handed alpha
Helix 15
15
E
468 480Right-handed alpha
Helix 16
16
E
503 509Right-handed alpha
Helix 17
17
E
509 519Right-handed alpha
Helix 18
18
F
391 401Right-handed alpha
Helix 19
19
F
468 479Right-handed alpha
Helix 20
20
F
503 518Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 4EYT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
406 410first strand
Strand 2
A
462 466anti-parallel
Strand 3
A
380 384anti-parallel
Strand 4
A
494 499anti-parallel
Strand 5
A
486 491anti-parallel
Strand 6
A
480 481anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
406 409first strand
Strand 2
B
462 466anti-parallel
Strand 3
B
380 384anti-parallel
Strand 4
B
494 499anti-parallel
Strand 5
B
488 491anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
406 410first strand
Strand 2
C
462 466anti-parallel
Strand 3
C
380 384anti-parallel
Strand 4
C
494 499anti-parallel
Strand 5
C
488 491anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
406 411first strand
Strand 2
D
461 466anti-parallel
Strand 3
D
380 384anti-parallel
Strand 4
D
494 499anti-parallel
Strand 5
D
488 491anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
406 410first strand
Strand 2
E
462 466anti-parallel
Strand 3
E
380 384anti-parallel
Strand 4
E
494 499anti-parallel
Strand 5
E
488 491anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
406 410first strand
Strand 2
F
462 466anti-parallel
Strand 3
F
380 384anti-parallel
Strand 4
F
494 499anti-parallel
Strand 5
F
488 491anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il