Analysis of interatomic Contacts of Structural Units in PDB entry:
4EZ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EZ8 entry

There is 1 chain in PDB entry 4EZ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 21VAL 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 4EZ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 38Right-handed alpha
Helix 2
2
A
74 87Right-handed alpha
Helix 3
3
A
91 97Right-handed alpha
Helix 4
4
A
108 115Right-handed alpha
Helix 5
5
A
128 136Right-handed alpha
Helix 6
6
A
153 165Right-handed alpha
Helix 7
7
A
180 184Right-handed 310
Helix 8
8
A
215 236Right-handed alpha
Helix 9
9
A
255 264Right-handed alpha
Helix 10
10
A
281 285Right-handed 310
Helix 11
11
A
286 288Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 4EZ8. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
49 60anti-parallel
Strand 3
A
238 252anti-parallel
Strand 4
A
201 212parallel
Strand 5
A
190 198anti-parallel
Strand 6
A
172 174anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 275first strand
Strand 2
A
290 293anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il