Analysis of interatomic Contacts of Structural Units in PDB entry:
4EZB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EZB entry

There is 1 chain in PDB entry 4EZB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR -8LEU 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 4EZB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-6 -1Right-handed alpha
Helix 2
2
A
10 22Right-handed alpha
Helix 3
3
A
33 37Right-handed 310
Helix 4
4
A
40 51Right-handed alpha
Helix 5
5
A
58 65Right-handed 310
Helix 6
6
A
73 75Right-handed 310
Helix 7
7
A
76 85Right-handed alpha
Helix 8
8
A
86 88Right-handed 310
Helix 9
9
A
101 114Right-handed alpha
Helix 10
10
A
131 134Right-handed 310
Helix 11
11
A
143 153Right-handed alpha
Helix 12
12
A
166 196Right-handed alpha
Helix 13
13
A
198 210Right-handed alpha
Helix 14
14
A
214 246Right-handed alpha
Helix 15
15
A
251 269Right-handed alpha
Helix 16
16
A
277 290Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 4EZB.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 56first strand
Strand 2
A
27 31parallel
Strand 3
A
3 7parallel
Strand 4
A
67 70parallel
Strand 5
A
93 96parallel
Strand 6
A
118 124parallel
Strand 7
A
136 140anti-parallel
Strand 8
A
157 162parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il