Analysis of interatomic Contacts of Structural Units in PDB entry:
4EZE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EZE entry

There are 2 chains in PDB entry 4EZE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN -1LEU 295
B
 MET 1LEU 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 33 helices in PDB entry 4EZE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 24Right-handed alpha
Helix 2
2
A
41 44Right-handed 310
Helix 3
3
A
55 57Right-handed 310
Helix 4
4
A
58 72Right-handed alpha
Helix 5
5
A
101 110Right-handed alpha
Helix 6
6
A
112 125Right-handed alpha
Helix 7
7
A
129 140Right-handed alpha
Helix 8
8
A
145 155Right-handed alpha
Helix 9
9
A
161 172Right-handed alpha
Helix 10
10
A
184 194Right-handed alpha
Helix 11
11
A
221 237Right-handed alpha
Helix 12
12
A
239 241Right-handed 310
Helix 13
13
A
249 251Right-handed 310
Helix 14
14
A
252 259Right-handed alpha
Helix 15
15
A
268 275Right-handed alpha
Helix 16
16
A
283 291Right-handed 310
Helix 17
17
B
11 24Right-handed alpha
Helix 18
18
B
41 44Right-handed 310
Helix 19
19
B
53 57Right-handed 310
Helix 20
20
B
58 73Right-handed alpha
Helix 21
21
B
101 110Right-handed alpha
Helix 22
22
B
112 125Right-handed alpha
Helix 23
23
B
129 142Right-handed alpha
Helix 24
24
B
145 156Right-handed alpha
Helix 25
25
B
161 172Right-handed alpha
Helix 26
26
B
184 194Right-handed alpha
Helix 27
27
B
221 237Right-handed alpha
Helix 28
28
B
239 241Right-handed 310
Helix 29
29
B
249 251Right-handed 310
Helix 30
30
B
252 259Right-handed alpha
Helix 31
31
B
268 275Right-handed alpha
Helix 32
32
B
283 286Right-handed 310
Helix 33
33
B
287 292Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 4EZE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 40first strand
Strand 2
A
45 53anti-parallel
Strand 3
A
1 7anti-parallel
Strand 4
A
75 78anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 202first strand
Strand 2
A
175 183parallel
Strand 3
A
88 91parallel
Strand 4
A
243 247parallel
Strand 5
A
261 265parallel
Strand 6
A
277 279parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 207first strand
Strand 2
A
210 215anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 40first strand
Strand 2
B
45 52anti-parallel
Strand 3
B
2 7anti-parallel
Strand 4
B
75 78anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 202first strand
Strand 2
B
175 183parallel
Strand 3
B
88 91parallel
Strand 4
B
243 247parallel
Strand 5
B
261 265parallel
Strand 6
B
277 279parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
204 207first strand
Strand 2
B
210 215anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il