Analysis of interatomic Contacts of Structural Units in PDB entry:
4F06


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F06 entry

There is 1 chain in PDB entry 4F06 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 24GLN 391
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4F06. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 57Right-handed alpha
Helix 2
2
A
76 90Right-handed alpha
Helix 3
3
A
101 109Right-handed alpha
Helix 4
4
A
111 116Right-handed alpha
Helix 5
5
A
126 133Right-handed 310
Helix 6
6
A
142 157Right-handed alpha
Helix 7
7
A
169 186Right-handed alpha
Helix 8
8
A
203 214Right-handed alpha
Helix 9
9
A
225 238Right-handed alpha
Helix 10
10
A
252 257Right-handed 310
Helix 11
11
A
258 263Right-handed alpha
Helix 12
12
A
264 267Right-handed 310
Helix 13
13
A
281 294Right-handed alpha
Helix 14
14
A
297 301Right-handed 310
Helix 15
15
A
302 322Right-handed alpha
Helix 16
16
A
327 336Right-handed alpha
Helix 17
17
A
385 390Right-handed alpha
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There are 3 sheets in PDB entry 4F06. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 60first strand
Strand 2
A
63 71anti-parallel
Strand 3
A
25 32parallel
Strand 4
A
95 98parallel
Strand 5
A
119 121parallel
Strand 6
A
136 138parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 196first strand
Strand 2
A
161 167parallel
Strand 3
A
217 221parallel
Strand 4
A
246 250parallel
Strand 5
A
270 273parallel
Strand 6
A
356 368anti-parallel
Strand 7
A
345 349anti-parallel
Strand 8
A
339 342anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 196first strand
Strand 2
A
161 167parallel
Strand 3
A
217 221parallel
Strand 4
A
246 250parallel
Strand 5
A
270 273parallel
Strand 6
A
356 368anti-parallel
Strand 7
A
371 383anti-parallel
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