Analysis of interatomic Contacts of Structural Units in PDB entry:
4F0I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F0I entry

There are 2 chains in PDB entry 4F0I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 500VAL 789
B
 CYS 500VAL 793
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 4F0I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
505 507Right-handed 310
Helix 2
2
A
552 566Right-handed alpha
Helix 3
3
A
595 603Right-handed alpha
Helix 4
4
A
622 643Right-handed alpha
Helix 5
5
A
651 653Right-handed 310
Helix 6
6
A
670 675Right-handed alpha
Helix 7
7
A
676 679Right-handed 310
Helix 8
8
A
683 685Right-handed 310
Helix 9
9
A
689 693Right-handed 310
Helix 10
10
A
694 701Right-handed alpha
Helix 11
11
A
704 720Right-handed alpha
Helix 12
12
A
731 742Right-handed alpha
Helix 13
13
A
752 763Right-handed alpha
Helix 14
14
A
766 770Right-handed 310
Helix 15
15
A
772 786Right-handed alpha
Helix 16
16
B
505 507Right-handed 310
Helix 17
17
B
549 566Right-handed alpha
Helix 18
18
B
595 603Right-handed alpha
Helix 19
19
B
622 643Right-handed alpha
Helix 20
20
B
651 653Right-handed 310
Helix 21
21
B
659 661Right-handed 310
Helix 22
22
B
670 675Right-handed alpha
Helix 23
23
B
676 679Right-handed 310
Helix 24
24
B
689 693Right-handed 310
Helix 25
25
B
694 701Right-handed alpha
Helix 26
26
B
704 721Right-handed alpha
Helix 27
27
B
731 741Right-handed alpha
Helix 28
28
B
752 763Right-handed alpha
Helix 29
29
B
766 770Right-handed 310
Helix 30
30
B
772 786Right-handed alpha
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There are 6 sheets in PDB entry 4F0I. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
509 518first strand
Strand 2
A
521 528anti-parallel
Strand 3
A
539 545anti-parallel
Strand 4
A
585 589anti-parallel
Strand 5
A
574 578anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
655 657first strand
Strand 2
A
663 665anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
680 681first strand
Strand 2
A
687 688anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
509 517first strand
Strand 2
B
521 528anti-parallel
Strand 3
B
538 545anti-parallel
Strand 4
B
585 589anti-parallel
Strand 5
B
574 578anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
655 657first strand
Strand 2
B
663 665anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
680 682first strand
Strand 2
B
686 688anti-parallel
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