Analysis of interatomic Contacts of Structural Units in PDB entry:
4F0S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F0S entry

There is 1 chain in PDB entry 4F0S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 5ALA 438
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 4F0S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
44 46Right-handed 310
Helix 2
2
A
72 79Right-handed 310
Helix 3
3
A
86 94Right-handed alpha
Helix 4
4
A
94 103Right-handed alpha
Helix 5
5
A
104 122Right-handed alpha
Helix 6
6
A
133 145Right-handed alpha
Helix 7
7
A
164 177Right-handed alpha
Helix 8
8
A
178 180Right-handed 310
Helix 9
9
A
193 197Right-handed 310
Helix 10
10
A
198 213Right-handed alpha
Helix 11
11
A
223 235Right-handed alpha
Helix 12
12
A
237 246Right-handed alpha
Helix 13
13
A
261 272Right-handed alpha
Helix 14
14
A
278 285Right-handed alpha
Helix 15
15
A
291 298Right-handed alpha
Helix 16
16
A
308 312Right-handed 310
Helix 17
17
A
316 333Right-handed alpha
Helix 18
18
A
339 348Right-handed alpha
Helix 19
19
A
348 355Right-handed alpha
Helix 20
20
A
379 383Right-handed 310
Helix 21
21
A
387 395Right-handed alpha
Helix 22
22
A
397 399Right-handed 310
Helix 23
23
A
421 438Right-handed alpha
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There are 3 sheets in PDB entry 4F0S. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 42first strand
Strand 2
A
24 33anti-parallel
Strand 3
A
8 16anti-parallel
Strand 4
A
54 64parallel
Strand 5
A
372 376anti-parallel
Strand 6
A
401 406anti-parallel
Strand 7
A
409 413anti-parallel
Strand 8
A
416 417anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 71first strand
Strand 2
A
124 129parallel
Strand 3
A
147 154parallel
Strand 4
A
185 191parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 220first strand
Strand 2
A
252 256parallel
Strand 3
A
274 277parallel
Strand 4
A
301 304parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il