Analysis of interatomic Contacts of Structural Units in PDB entry:
4F0Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F0Y entry

There are 2 chains in PDB entry 4F0Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 145
B
 MET 1ASP 145
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 4F0Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 9Right-handed 310
Helix 2
2
A
10 19Right-handed alpha
Helix 3
3
A
25 38Right-handed alpha
Helix 4
4
A
84 87Right-handed 310
Helix 5
5
A
90 105Right-handed alpha
Helix 6
6
A
119 128Right-handed alpha
Helix 7
7
B
10 22Right-handed alpha
Helix 8
8
B
25 38Right-handed alpha
Helix 9
9
B
90 106Right-handed alpha
Helix 10
10
B
119 129Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4F0Y.

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
42 49anti-parallel
Strand 3
A
52 62anti-parallel
Strand 4
A
74 82anti-parallel
Strand 5
A
110 116parallel
Strand 6
B
132 143anti-parallel
Strand 7
A
132 143anti-parallel
Strand 8
B
110 116anti-parallel
Strand 9
B
74 82parallel
Strand 10
B
53 62anti-parallel
Strand 11
B
42 48anti-parallel
Strand 12
B
2 5anti-parallel
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