Analysis of interatomic Contacts of Structural Units in PDB entry:
4F1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F1V entry

There is 1 chain in PDB entry 4F1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1000LEU 1371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 4F1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1010 1015Right-handed alpha
Helix 2
2
A
1031 1042Right-handed alpha
Helix 3
3
A
1043 1047Right-handed 310
Helix 4
4
A
1066 1077Right-handed alpha
Helix 5
5
A
1077 1082Right-handed alpha
Helix 6
6
A
1109 1119Right-handed alpha
Helix 7
7
A
1123 1127Right-handed 310
Helix 8
8
A
1145 1159Right-handed alpha
Helix 9
9
A
1171 1175Right-handed 310
Helix 10
10
A
1188 1198Right-handed alpha
Helix 11
11
A
1215 1221Right-handed 310
Helix 12
12
A
1231 1235Right-handed 310
Helix 13
13
A
1242 1245Right-handed 310
Helix 14
14
A
1246 1252Right-handed alpha
Helix 15
15
A
1257 1261Right-handed 310
Helix 16
16
A
1263 1268Right-handed 310
Helix 17
17
A
1303 1318Right-handed alpha
Helix 18
18
A
1324 1331Right-handed alpha
Helix 19
19
A
1337 1349Right-handed alpha
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There are 4 sheets in PDB entry 4F1V. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1028 1029first strand
Strand 2
A
1004 1006parallel
Strand 3
A
1058 1061parallel
Strand 4
A
1290 1298anti-parallel
Strand 5
A
1084 1093anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1098 1099first strand
Strand 2
A
1203 1204anti-parallel
Strand 3
A
1137 1141parallel
Strand 4
A
1185 1187parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1107 1108first strand
Strand 2
A
1227 1228parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1271 1272first strand
Strand 2
A
1280 1281parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il