Analysis of interatomic Contacts of Structural Units in PDB entry:
4F3Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F3Q entry

There is 1 chain in PDB entry 4F3Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 6LEU 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4F3Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 40Right-handed alpha
Helix 2
2
A
42 45Right-handed 310
Helix 3
3
A
46 59Right-handed alpha
Helix 4
4
A
62 73Right-handed alpha
Helix 5
5
A
92 94Right-handed 310
Helix 6
6
A
105 120Right-handed alpha
Helix 7
7
A
130 132Right-handed 310
Helix 8
8
A
147 159Right-handed alpha
Helix 9
9
A
176 178Right-handed 310
Helix 10
10
A
179 190Right-handed alpha
Helix 11
11
A
210 226Right-handed alpha
Helix 12
12
A
240 244Right-handed 310
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There are 3 sheets in PDB entry 4F3Q. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 124first strand
Strand 2
A
83 90anti-parallel
Strand 3
A
96 103anti-parallel
Strand 4
A
230 235anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 165first strand
Strand 2
A
171 175anti-parallel
Strand 3
A
134 142anti-parallel
Strand 4
A
196 203anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 208first strand
Strand 2
A
237 238parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il