Analysis of interatomic Contacts of Structural Units in PDB entry:
4F47


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F47 entry

There is 1 chain in PDB entry 4F47 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 15ARG 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4F47. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 37Right-handed 310
Helix 2
2
A
41 58Right-handed alpha
Helix 3
3
A
124 131Right-handed alpha
Helix 4
4
A
147 152Right-handed 310
Helix 5
5
A
158 167Right-handed alpha
Helix 6
6
A
168 179Right-handed alpha
Helix 7
7
A
184 190Right-handed alpha
Helix 8
8
A
201 216Right-handed alpha
Helix 9
9
A
217 231Right-handed alpha
Helix 10
10
A
235 248Right-handed alpha
Helix 11
11
A
249 253Right-handed 310
Helix 12
12
A
254 265Right-handed alpha
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There are 2 sheets in PDB entry 4F47. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 23first strand
Strand 2
A
26 31anti-parallel
Strand 3
A
63 68parallel
Strand 4
A
114 118parallel
Strand 5
A
135 139parallel
Strand 6
A
195 197parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 123first strand
Strand 2
A
143 145parallel
Strand 3
A
182 183anti-parallel
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