Analysis of interatomic Contacts of Structural Units in PDB entry:
4F4C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F4C entry

There is 1 chain in PDB entry 4F4C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4LYS 1306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 4F4C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 17Right-handed alpha
Helix 2
2
A
20 34Right-handed alpha
Helix 3
3
A
61 66Right-handed alpha
Helix 4
4
A
70 89Right-handed alpha
Helix 5
5
A
89 114Right-handed alpha
Helix 6
6
A
127 180Right-handed alpha
Helix 7
7
A
183 190Right-handed alpha
Helix 8
8
A
194 209Right-handed alpha
Helix 9
9
A
211 235Right-handed alpha
Helix 10
10
A
235 244Right-handed alpha
Helix 11
11
A
245 284Right-handed alpha
Helix 12
12
A
284 291Right-handed alpha
Helix 13
13
A
293 346Right-handed alpha
Helix 14
14
A
351 393Right-handed alpha
Helix 15
15
A
456 465Right-handed alpha
Helix 16
16
A
486 493Right-handed alpha
Helix 17
17
A
508 514Right-handed alpha
Helix 18
18
A
520 531Right-handed alpha
Helix 19
19
A
533 540Right-handed alpha
Helix 20
20
A
556 570Right-handed alpha
Helix 21
21
A
589 602Right-handed alpha
Helix 22
22
A
635 641Right-handed alpha
Helix 23
23
A
644 664Right-handed alpha
Helix 24
24
A
721 729Right-handed alpha
Helix 25
25
A
739 747Right-handed alpha
Helix 26
26
A
750 764Right-handed alpha
Helix 27
27
A
766 782Right-handed alpha
Helix 28
28
A
792 839Right-handed alpha
Helix 29
29
A
847 850Right-handed 310
Helix 30
30
A
851 861Right-handed alpha
Helix 31
31
A
861 868Right-handed alpha
Helix 32
32
A
871 895Right-handed alpha
Helix 33
33
A
895 917Right-handed alpha
Helix 34
34
A
929 944Right-handed alpha
Helix 35
35
A
944 951Right-handed alpha
Helix 36
36
A
953 987Right-handed alpha
Helix 37
37
A
988 1004Right-handed alpha
Helix 38
38
A
1013 1026Right-handed alpha
Helix 39
39
A
1032 1035Right-handed 310
Helix 40
40
A
1036 1057Right-handed alpha
Helix 41
41
A
1120 1126Right-handed alpha
Helix 42
42
A
1147 1153Right-handed alpha
Helix 43
43
A
1169 1174Right-handed alpha
Helix 44
44
A
1183 1194Right-handed alpha
Helix 45
45
A
1196 1202Right-handed alpha
Helix 46
46
A
1219 1234Right-handed alpha
Helix 47
47
A
1250 1261Right-handed alpha
Helix 48
48
A
1298 1305Right-handed alpha
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There are 6 sheets in PDB entry 4F4C. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
434 441first strand
Strand 2
A
416 423anti-parallel
Strand 3
A
472 477anti-parallel
Strand 4
A
480 481anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
494 497first strand
Strand 2
A
575 579parallel
Strand 3
A
605 609parallel
Strand 4
A
446 451parallel
Strand 5
A
621 626parallel
Strand 6
A
629 634anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 507first strand
Strand 2
A
547 548anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1095 1102first strand
Strand 2
A
1077 1084anti-parallel
Strand 3
A
1135 1138anti-parallel
Strand 4
A
1141 1142anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1155 1158first strand
Strand 2
A
1238 1242parallel
Strand 3
A
1268 1272parallel
Strand 4
A
1107 1111parallel
Strand 5
A
1284 1288parallel
Strand 6
A
1293 1297anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1167 1168first strand
Strand 2
A
1210 1211anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il