Analysis of interatomic Contacts of Structural Units in PDB entry:
4F6C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F6C entry

There are 2 chains in PDB entry 4F6C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2013ASN 2390
B
 LEU 2012ASN 2390
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 4F6C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2018 2033Right-handed alpha
Helix 2
2
A
2054 2065Right-handed alpha
Helix 3
3
A
2079 2095Right-handed alpha
Helix 4
4
A
2096 2105Right-handed alpha
Helix 5
5
A
2145 2163Right-handed alpha
Helix 6
6
A
2174 2176Right-handed 310
Helix 7
7
A
2201 2220Right-handed alpha
Helix 8
8
A
2244 2247Right-handed 310
Helix 9
9
A
2248 2260Right-handed alpha
Helix 10
10
A
2265 2269Right-handed alpha
Helix 11
11
A
2277 2288Right-handed alpha
Helix 12
12
A
2307 2316Right-handed alpha
Helix 13
13
A
2323 2334Right-handed alpha
Helix 14
14
A
2336 2348Right-handed alpha
Helix 15
15
A
2356 2366Right-handed alpha
Helix 16
16
A
2374 2390Right-handed alpha
Helix 17
17
B
2018 2033Right-handed alpha
Helix 18
18
B
2035 2040Right-handed 310
Helix 19
19
B
2054 2065Right-handed alpha
Helix 20
20
B
2079 2095Right-handed alpha
Helix 21
21
B
2096 2105Right-handed alpha
Helix 22
22
B
2143 2164Right-handed alpha
Helix 23
23
B
2174 2176Right-handed 310
Helix 24
24
B
2201 2220Right-handed alpha
Helix 25
25
B
2244 2247Right-handed 310
Helix 26
26
B
2248 2258Right-handed alpha
Helix 27
27
B
2265 2270Right-handed alpha
Helix 28
28
B
2277 2289Right-handed alpha
Helix 29
29
B
2307 2316Right-handed alpha
Helix 30
30
B
2323 2334Right-handed alpha
Helix 31
31
B
2336 2342Right-handed alpha
Helix 32
32
B
2356 2367Right-handed alpha
Helix 33
33
B
2374 2389Right-handed alpha
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There are 12 sheets in PDB entry 4F6C. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2107 2112first strand
Strand 2
A
2068 2076parallel
Strand 3
A
2045 2050parallel
Strand 4
A
2128 2131parallel
Strand 5
A
2166 2172parallel
Strand 6
A
2224 2229parallel
Strand 7
A
2296 2299parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2178 2179first strand
Strand 2
A
2350 2351anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2187 2188first strand
Strand 2
A
2353 2354parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2232 2233first strand
Strand 2
A
2275 2276parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2262 2264first strand
Strand 2
A
2320 2322parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2271 2272first strand
Strand 2
A
2305 2306anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2107 2112first strand
Strand 2
B
2068 2076parallel
Strand 3
B
2045 2050parallel
Strand 4
B
2128 2131parallel
Strand 5
B
2166 2172parallel
Strand 6
B
2224 2229parallel
Strand 7
B
2296 2299parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2178 2179first strand
Strand 2
B
2350 2351anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2187 2188first strand
Strand 2
B
2353 2354parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2232 2233first strand
Strand 2
B
2275 2276parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2262 2264first strand
Strand 2
B
2320 2322parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2271 2272first strand
Strand 2
B
2305 2306anti-parallel
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