Analysis of interatomic Contacts of Structural Units in PDB entry:
4F6E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F6E entry

There are 58 chains in PDB entry 4F6E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2LEU 7
A
 TRP 9THR 28
A
 HIS 30ALA 53
A
 GLU 55ARG 62
A
 MET 64ILE 71
A
 PHE 73ALA 104
A
 ALA 106ILE 118
A
 LEU 120THR 123
A
 LEU 125VAL 137
A
 ASN 139GLY 144
A
 LEU 146ASN 180
A
 ARG 182PHE 186
A
 ALA 188TRP 195
A
 GLU 197GLY 205
A
 ILE 207ILE 207
B
 VAL 2LEU 7
B
 TRP 9THR 28
B
 HIS 30ALA 53
B
 GLU 55ARG 62
B
 MET 64ILE 71
B
 PHE 73ALA 104
B
 ALA 106ILE 118
B
 LEU 120THR 123
B
 LEU 125VAL 137
B
 ASN 139GLY 144
B
 LEU 146ASN 180
B
 ARG 182PHE 186
B
 ALA 188TRP 195
B
 GLU 197GLY 205
C
 VAL 2LEU 7
C
 TRP 9THR 28
C
 HIS 30ALA 53
C
 GLU 55ARG 62
C
 MET 64ILE 71
C
 PHE 73ALA 104
C
 ALA 106ILE 118
C
 LEU 120THR 123
C
 LEU 125VAL 137
C
 ASN 139GLY 144
C
 LEU 146ASN 180
C
 ARG 182PHE 186
C
 ALA 188TRP 195
C
 GLU 197GLY 205
C
 ILE 207ILE 207
D
 VAL 2LEU 7
D
 TRP 9THR 28
D
 HIS 30ALA 53
D
 GLU 55ARG 62
D
 MET 64ILE 71
D
 PHE 73ALA 104
D
 ALA 106ILE 118
D
 LEU 120THR 123
D
 LEU 125VAL 137
D
 ASN 139GLY 144
D
 LEU 146ASN 180
D
 ARG 182PHE 186
D
 ALA 188TRP 195
D
 GLU 197GLY 205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 4F6E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 15Right-handed 310
Helix 2
2
A
19 29Right-handed alpha
Helix 3
3
A
29 55Right-handed alpha
Helix 4
4
A
57 87Right-handed alpha
Helix 5
5
A
90 94Right-handed 310
Helix 6
6
A
100 112Right-handed alpha
Helix 7
7
A
113 127Right-handed alpha
Helix 8
8
A
141 143Right-handed 310
Helix 9
9
A
170 173Right-handed 310
Helix 10
10
A
174 179Right-handed alpha
Helix 11
11
A
181 190Right-handed alpha
Helix 12
12
A
191 193Right-handed 310
Helix 13
13
A
194 205Right-handed alpha
Helix 14
14
B
10 15Right-handed 310
Helix 15
15
B
19 29Right-handed alpha
Helix 16
16
B
29 55Right-handed alpha
Helix 17
17
B
57 87Right-handed alpha
Helix 18
18
B
90 94Right-handed 310
Helix 19
19
B
100 112Right-handed alpha
Helix 20
20
B
113 127Right-handed alpha
Helix 21
21
B
170 173Right-handed 310
Helix 22
22
B
174 179Right-handed alpha
Helix 23
23
B
181 190Right-handed alpha
Helix 24
24
B
191 193Right-handed 310
Helix 25
25
B
194 205Right-handed alpha
Helix 26
26
C
19 29Right-handed alpha
Helix 27
27
C
29 55Right-handed alpha
Helix 28
28
C
57 87Right-handed alpha
Helix 29
29
C
90 94Right-handed 310
Helix 30
30
C
100 112Right-handed alpha
Helix 31
31
C
113 127Right-handed alpha
Helix 32
32
C
170 173Right-handed 310
Helix 33
33
C
174 179Right-handed alpha
Helix 34
34
C
181 190Right-handed alpha
Helix 35
35
C
191 193Right-handed 310
Helix 36
36
C
194 205Right-handed alpha
Helix 37
37
D
19 29Right-handed alpha
Helix 38
38
D
29 55Right-handed alpha
Helix 39
39
D
57 87Right-handed alpha
Helix 40
40
D
90 94Right-handed 310
Helix 41
41
D
100 112Right-handed alpha
Helix 42
42
D
113 127Right-handed alpha
Helix 43
43
D
170 173Right-handed 310
Helix 44
44
D
174 179Right-handed alpha
Helix 45
45
D
181 190Right-handed alpha
Helix 46
46
D
191 193Right-handed 310
Helix 47
47
D
194 205Right-handed alpha
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There are 4 sheets in PDB entry 4F6E. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 152first strand
Strand 2
A
132 139anti-parallel
Strand 3
A
161 168anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 152first strand
Strand 2
B
132 139anti-parallel
Strand 3
B
161 168anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
145 152first strand
Strand 2
C
132 139anti-parallel
Strand 3
C
161 168anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
145 152first strand
Strand 2
D
132 139anti-parallel
Strand 3
D
161 168anti-parallel
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