Analysis of interatomic Contacts of Structural Units in PDB entry:
4F7O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F7O entry

There are 2 chains in PDB entry 4F7O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2THR 257
B
 ALA 2THR 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 4F7O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 17Right-handed alpha
Helix 2
2
A
32 43Right-handed alpha
Helix 3
3
A
59 72Right-handed alpha
Helix 4
4
A
103 108Right-handed alpha
Helix 5
5
A
111 125Right-handed alpha
Helix 6
6
A
148 162Right-handed alpha
Helix 7
7
A
234 251Right-handed alpha
Helix 8
8
B
5 17Right-handed alpha
Helix 9
9
B
32 43Right-handed alpha
Helix 10
10
B
59 72Right-handed alpha
Helix 11
11
B
111 127Right-handed alpha
Helix 12
12
B
149 162Right-handed alpha
Helix 13
13
B
234 252Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4F7O. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 22first strand
Strand 2
A
225 231parallel
Strand 3
A
54 58parallel
Strand 4
A
89 97parallel
Strand 5
A
78 86anti-parallel
Strand 6
A
133 139anti-parallel
Strand 7
A
167 170parallel
Strand 8
A
183 188anti-parallel
Strand 9
A
221 223anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
221 223first strand
Strand 2
B
182 188anti-parallel
Strand 3
B
166 171anti-parallel
Strand 4
B
133 139parallel
Strand 5
B
78 86anti-parallel
Strand 6
B
89 97anti-parallel
Strand 7
B
54 58parallel
Strand 8
B
225 229parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il