Analysis of interatomic Contacts of Structural Units in PDB entry:
4F7Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F7Z entry

There is 1 chain in PDB entry 4F7Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 10ARG 991
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 4F7Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 21Right-handed alpha
Helix 2
2
A
27 39Right-handed alpha
Helix 3
3
A
48 59Right-handed alpha
Helix 4
4
A
114 120Right-handed 310
Helix 5
5
A
140 155Right-handed alpha
Helix 6
6
A
182 200Right-handed alpha
Helix 7
7
A
201 204Right-handed 310
Helix 8
8
A
220 231Right-handed alpha
Helix 9
9
A
236 250Right-handed alpha
Helix 10
10
A
273 276Right-handed 310
Helix 11
11
A
283 292Right-handed alpha
Helix 12
12
A
293 315Right-handed alpha
Helix 13
13
A
316 321Right-handed 310
Helix 14
14
A
322 334Right-handed alpha
Helix 15
15
A
335 340Right-handed 310
Helix 16
16
A
343 351Right-handed alpha
Helix 17
17
A
405 409Right-handed 310
Helix 18
18
A
432 445Right-handed alpha
Helix 19
19
A
486 498Right-handed alpha
Helix 20
20
A
504 523Right-handed alpha
Helix 21
21
A
524 538Right-handed alpha
Helix 22
22
A
544 571Right-handed alpha
Helix 23
23
A
572 576Right-handed 310
Helix 24
24
A
577 594Right-handed alpha
Helix 25
25
A
598 603Right-handed alpha
Helix 26
26
A
603 615Right-handed alpha
Helix 27
27
A
673 686Right-handed alpha
Helix 28
28
A
728 730Right-handed 310
Helix 29
29
A
746 751Right-handed alpha
Helix 30
30
A
754 772Right-handed alpha
Helix 31
31
A
774 784Right-handed alpha
Helix 32
32
A
784 789Right-handed alpha
Helix 33
33
A
792 815Right-handed alpha
Helix 34
34
A
818 839Right-handed alpha
Helix 35
35
A
841 852Right-handed alpha
Helix 36
36
A
854 859Right-handed alpha
Helix 37
37
A
860 866Right-handed alpha
Helix 38
38
A
868 881Right-handed alpha
Helix 39
39
A
884 897Right-handed alpha
Helix 40
40
A
905 919Right-handed alpha
Helix 41
41
A
930 947Right-handed alpha
Helix 42
42
A
962 971Right-handed alpha
Helix 43
43
A
977 987Right-handed alpha
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There are 7 sheets in PDB entry 4F7Z. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 64first strand
Strand 2
A
133 139anti-parallel
Strand 3
A
79 85anti-parallel
Strand 4
A
112 113anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 71first strand
Strand 2
A
126 129anti-parallel
Strand 3
A
87 92anti-parallel
Strand 4
A
102 108anti-parallel
Strand 5
A
402 403anti-parallel
Strand 6
A
375 381anti-parallel
Strand 7
A
425 431anti-parallel
Strand 8
A
355 359anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 209first strand
Strand 2
A
212 219anti-parallel
Strand 3
A
268 271anti-parallel
Strand 4
A
253 255anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 367first strand
Strand 2
A
417 420anti-parallel
Strand 3
A
383 388anti-parallel
Strand 4
A
392 398anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 450first strand
Strand 2
A
455 460anti-parallel
Strand 3
A
481 485anti-parallel
Strand 4
A
928 929anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
624 625first strand
Strand 2
A
651 657parallel
Strand 3
A
663 669anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
702 704first strand
Strand 2
A
691 696anti-parallel
Strand 3
A
721 726anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il