Analysis of interatomic Contacts of Structural Units in PDB entry:
4F82


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F82 entry

There are 2 chains in PDB entry 4F82 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -2SER 168
B
 HIS 0SER 168
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 4F82. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 38Right-handed alpha
Helix 2
2
A
52 58Right-handed alpha
Helix 3
3
A
58 73Right-handed alpha
Helix 4
4
A
85 96Right-handed alpha
Helix 5
5
A
110 117Right-handed alpha
Helix 6
6
A
123 126Right-handed 310
Helix 7
7
A
158 165Right-handed alpha
Helix 8
8
B
33 38Right-handed alpha
Helix 9
9
B
52 58Right-handed alpha
Helix 10
10
B
58 73Right-handed alpha
Helix 11
11
B
85 97Right-handed alpha
Helix 12
12
B
110 116Right-handed alpha
Helix 13
13
B
123 126Right-handed 310
Helix 14
14
B
158 165Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 4F82. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 32first strand
Strand 2
A
12 17anti-parallel
Strand 3
A
103 106anti-parallel
Strand 4
A
77 82parallel
Strand 5
A
41 46parallel
Strand 6
A
134 139anti-parallel
Strand 7
A
142 148anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 121first strand
Strand 2
A
129 131anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 32first strand
Strand 2
B
12 17anti-parallel
Strand 3
B
103 106anti-parallel
Strand 4
B
77 82parallel
Strand 5
B
41 46parallel
Strand 6
B
134 139anti-parallel
Strand 7
B
142 148anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 121first strand
Strand 2
B
129 131anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il