Analysis of interatomic Contacts of Structural Units in PDB entry:
4F85


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F85 entry

There is 1 chain in PDB entry 4F85 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 55VAL 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4F85. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
65 70Right-handed alpha
Helix 2
2
A
76 99Right-handed alpha
Helix 3
3
A
117 128Right-handed alpha
Helix 4
4
A
137 151Right-handed alpha
Helix 5
5
A
182 186Right-handed 310
Helix 6
6
A
187 198Right-handed alpha
Helix 7
7
A
214 217Right-handed 310
Helix 8
8
A
220 231Right-handed alpha
Helix 9
9
A
236 246Right-handed alpha
Helix 10
10
A
257 269Right-handed alpha
Helix 11
11
A
277 288Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4F85.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 161first strand
Strand 2
A
130 135parallel
Strand 3
A
108 112parallel
Strand 4
A
174 180parallel
Strand 5
A
199 212parallel
Strand 6
A
290 299anti-parallel
Strand 7
A
249 256anti-parallel
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