Analysis of interatomic Contacts of Structural Units in PDB entry:
4F8X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4F8X entry

There is 1 chain in PDB entry 4F8X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 26CYS 360
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4F8X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 36Right-handed alpha
Helix 2
2
A
50 54Right-handed 310
Helix 3
3
A
55 66Right-handed alpha
Helix 4
4
A
76 79Right-handed 310
Helix 5
5
A
89 102Right-handed alpha
Helix 6
6
A
118 123Right-handed alpha
Helix 7
7
A
127 147Right-handed alpha
Helix 8
8
A
148 150Right-handed 310
Helix 9
9
A
169 176Right-handed alpha
Helix 10
10
A
177 194Right-handed alpha
Helix 11
11
A
212 228Right-handed alpha
Helix 12
12
A
248 262Right-handed alpha
Helix 13
13
A
282 303Right-handed alpha
Helix 14
14
A
316 320Right-handed 310
Helix 15
15
A
321 326Right-handed alpha
Helix 16
16
A
342 353Right-handed alpha
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There are 2 sheets in PDB entry 4F8X. Click on sheet of interest to get list of strands forming it: A, B,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 242first strand
Strand 2
A
265 274parallel
Strand 3
A
307 312parallel
Strand 4
A
40 45parallel
Strand 5
A
68 71parallel
Strand 6
A
105 112parallel
Strand 7
A
152 157parallel
Strand 8
A
200 205parallel
Strand 9
A
234 237parallel
Strand 10
A
265 274parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 83first strand
Strand 2
A
86 87anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il