Analysis of interatomic Contacts of Structural Units in PDB entry:
4FB5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FB5 entry

There are 2 chains in PDB entry 4FB5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2ILE 370
B
 LYS 2ILE 370
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4FB5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 23Right-handed alpha
Helix 2
2
A
24 30Right-handed alpha
Helix 3
3
A
47 56Right-handed alpha
Helix 4
4
A
63 70Right-handed alpha
Helix 5
5
A
81 83Right-handed 310
Helix 6
6
A
84 95Right-handed alpha
Helix 7
7
A
108 122Right-handed alpha
Helix 8
8
A
130 134Right-handed 310
Helix 9
9
A
135 147Right-handed alpha
Helix 10
10
A
173 181Right-handed 310
Helix 11
11
A
183 188Right-handed alpha
Helix 12
12
A
189 200Right-handed alpha
Helix 13
13
A
276 278Right-handed 310
Helix 14
14
A
289 293Right-handed 310
Helix 15
15
A
306 311Right-handed alpha
Helix 16
16
A
321 337Right-handed alpha
Helix 17
17
A
344 364Right-handed alpha
Helix 18
18
B
14 30Right-handed alpha
Helix 19
19
B
47 55Right-handed alpha
Helix 20
20
B
64 70Right-handed alpha
Helix 21
21
B
84 95Right-handed alpha
Helix 22
22
B
108 122Right-handed alpha
Helix 23
23
B
130 134Right-handed 310
Helix 24
24
B
135 147Right-handed alpha
Helix 25
25
B
173 181Right-handed 310
Helix 26
26
B
183 188Right-handed alpha
Helix 27
27
B
189 200Right-handed alpha
Helix 28
28
B
276 278Right-handed 310
Helix 29
29
B
289 293Right-handed 310
Helix 30
30
B
306 310Right-handed 310
Helix 31
31
B
321 337Right-handed alpha
Helix 32
32
B
345 364Right-handed alpha
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There are 7 sheets in PDB entry 4FB5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
36 41parallel
Strand 3
A
5 9parallel
Strand 4
A
75 78parallel
Strand 5
A
98 101parallel
Strand 6
A
126 128parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 299first strand
Strand 2
A
280 285anti-parallel
Strand 3
A
269 274anti-parallel
Strand 4
A
259 266anti-parallel
Strand 5
A
153 161anti-parallel
Strand 6
A
244 250parallel
Strand 7
A
232 239anti-parallel
Strand 8
A
203 211anti-parallel
Strand 9
A
368 369anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 218first strand
Strand 2
A
224 226anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 61first strand
Strand 2
B
36 41parallel
Strand 3
B
5 9parallel
Strand 4
B
75 78parallel
Strand 5
B
98 101parallel
Strand 6
B
126 128parallel
Strand 7
B
343 344anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 211first strand
Strand 2
B
232 239anti-parallel
Strand 3
B
243 250anti-parallel
Strand 4
B
153 161parallel
Strand 5
B
259 266anti-parallel
Strand 6
B
269 274anti-parallel
Strand 7
B
280 285anti-parallel
Strand 8
B
296 299anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 211first strand
Strand 2
B
232 239anti-parallel
Strand 3
B
203 206anti-parallel
Strand 4
B
368 369anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 218first strand
Strand 2
B
224 226anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il