Analysis of interatomic Contacts of Structural Units in PDB entry:
4FBE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FBE entry

There are 2 chains in PDB entry 4FBE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 33LEU 348
B
 GLU 33ALA 349
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 4FBE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 42Right-handed 310
Helix 2
2
A
48 57Right-handed alpha
Helix 3
3
A
60 72Right-handed alpha
Helix 4
4
A
79 96Right-handed alpha
Helix 5
5
A
154 168Right-handed alpha
Helix 6
6
A
168 173Right-handed alpha
Helix 7
7
A
174 177Right-handed 310
Helix 8
8
A
202 216Right-handed alpha
Helix 9
9
A
244 261Right-handed alpha
Helix 10
10
A
295 301Right-handed alpha
Helix 11
11
A
323 327Right-handed 310
Helix 12
12
A
328 348Right-handed alpha
Helix 13
13
B
38 42Right-handed 310
Helix 14
14
B
48 57Right-handed alpha
Helix 15
15
B
60 72Right-handed alpha
Helix 16
16
B
79 96Right-handed alpha
Helix 17
17
B
154 168Right-handed alpha
Helix 18
18
B
168 173Right-handed alpha
Helix 19
19
B
174 177Right-handed 310
Helix 20
20
B
202 215Right-handed alpha
Helix 21
21
B
241 243Right-handed 310
Helix 22
22
B
244 262Right-handed alpha
Helix 23
23
B
295 300Right-handed alpha
Helix 24
24
B
323 327Right-handed 310
Helix 25
25
B
328 348Right-handed alpha
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There are 4 sheets in PDB entry 4FBE. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 36first strand
Strand 2
A
281 286anti-parallel
Strand 3
A
237 239parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 109first strand
Strand 2
A
113 123anti-parallel
Strand 3
A
180 187anti-parallel
Strand 4
A
130 137parallel
Strand 5
A
221 227parallel
Strand 6
A
305 308parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 36first strand
Strand 2
B
281 286anti-parallel
Strand 3
B
237 239parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 109first strand
Strand 2
B
113 123anti-parallel
Strand 3
B
180 187anti-parallel
Strand 4
B
130 137parallel
Strand 5
B
221 227parallel
Strand 6
B
305 308parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il