Analysis of interatomic Contacts of Structural Units in PDB entry:
4FBM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FBM entry

There are 2 chains in PDB entry 4FBM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 35LEU 286
B
 GLN 35ALA 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 4FBM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
61 64Right-handed 310
Helix 2
2
A
65 75Right-handed alpha
Helix 3
3
A
90 97Right-handed alpha
Helix 4
4
A
98 115Right-handed alpha
Helix 5
5
A
126 139Right-handed alpha
Helix 6
6
A
157 162Right-handed alpha
Helix 7
7
A
197 212Right-handed alpha
Helix 8
8
A
213 215Right-handed 310
Helix 9
9
A
233 240Right-handed alpha
Helix 10
10
A
264 281Right-handed alpha
Helix 11
11
B
61 64Right-handed 310
Helix 12
12
B
65 73Right-handed alpha
Helix 13
13
B
90 96Right-handed alpha
Helix 14
14
B
98 117Right-handed alpha
Helix 15
15
B
126 139Right-handed alpha
Helix 16
16
B
157 165Right-handed alpha
Helix 17
17
B
197 211Right-handed alpha
Helix 18
18
B
212 215Right-handed 310
Helix 19
19
B
232 242Right-handed alpha
Helix 20
20
B
258 262Right-handed 310
Helix 21
21
B
264 281Right-handed alpha
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There are 6 sheets in PDB entry 4FBM. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 80first strand
Strand 2
A
50 55parallel
Strand 3
A
119 125parallel
Strand 4
A
145 149parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 174first strand
Strand 2
A
192 194anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 224first strand
Strand 2
A
247 252parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 45first strand
Strand 2
B
78 81anti-parallel
Strand 3
B
50 55parallel
Strand 4
B
119 125parallel
Strand 5
B
145 149parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 174first strand
Strand 2
B
192 194anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
219 224first strand
Strand 2
B
247 252parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il