Analysis of interatomic Contacts of Structural Units in PDB entry:
4FD5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FD5 entry

There is 1 chain in PDB entry 4FD5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 7ASN 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4FD5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 17Right-handed 310
Helix 2
2
A
18 30Right-handed alpha
Helix 3
3
A
34 40Right-handed alpha
Helix 4
4
A
49 61Right-handed alpha
Helix 5
5
A
91 100Right-handed alpha
Helix 6
6
A
102 117Right-handed alpha
Helix 7
7
A
120 126Right-handed alpha
Helix 8
8
A
140 143Right-handed 310
Helix 9
9
A
146 162Right-handed alpha
Helix 10
10
A
173 183Right-handed alpha
Helix 11
11
A
194 196Right-handed 310
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There is 1 sheet ( A) in PDB entry 4FD5.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 13first strand
Strand 2
A
66 69anti-parallel
Strand 3
A
75 85anti-parallel
Strand 4
A
129 138anti-parallel
Strand 5
A
166 171parallel
Strand 6
A
213 220anti-parallel
Strand 7
A
186 192anti-parallel
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