Analysis of interatomic Contacts of Structural Units in PDB entry:
4FDV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FDV entry

There is 1 chain in PDB entry 4FDV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2GLU 209
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4FDV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 24Right-handed alpha
Helix 2
2
A
30 45Right-handed alpha
Helix 3
3
A
48 51Right-handed 310
Helix 4
4
A
58 69Right-handed alpha
Helix 5
5
A
77 82Right-handed alpha
Helix 6
6
A
85 89Right-handed 310
Helix 7
7
A
103 112Right-handed alpha
Helix 8
8
A
114 120Right-handed alpha
Helix 9
9
A
123 128Right-handed alpha
Helix 10
10
A
137 149Right-handed alpha
Helix 11
11
A
168 180Right-handed alpha
Helix 12
12
A
193 206Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4FDV.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
184 187anti-parallel
Strand 3
A
158 161parallel
Strand 4
A
131 134parallel
Strand 5
A
73 75parallel
Strand 6
A
95 96parallel
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