Analysis of interatomic Contacts of Structural Units in PDB entry:
4FE9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FE9 entry

There is 1 chain in PDB entry 4FE9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 40GLU 485
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 4FE9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
57 59Right-handed 310
Helix 2
2
A
107 118Right-handed alpha
Helix 3
3
A
178 182Right-handed 310
Helix 4
4
A
222 225Right-handed 310
Helix 5
5
A
284 289Right-handed 310
Helix 6
6
A
341 349Right-handed alpha
Helix 7
7
A
394 398Right-handed 310
Helix 8
8
A
401 405Right-handed 310
Helix 9
9
A
437 443Right-handed 310
Back to top of page

There are 10 sheets in PDB entry 4FE9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
151 156parallel
Strand 3
A
126 137anti-parallel
Strand 4
A
79 87anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
151 156parallel
Strand 3
A
126 137anti-parallel
Strand 4
A
143 147anti-parallel
Strand 5
A
42 48parallel
Strand 6
A
63 72anti-parallel
Strand 7
A
102 106anti-parallel
Strand 8
A
96 97anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 184first strand
Strand 2
A
168 172anti-parallel
Strand 3
A
206 211anti-parallel
Strand 4
A
248 249anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 187first strand
Strand 2
A
194 201anti-parallel
Strand 3
A
254 261anti-parallel
Strand 4
A
266 271anti-parallel
Strand 5
A
237 239anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 216first strand
Strand 2
A
219 220anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 299first strand
Strand 2
A
279 282anti-parallel
Strand 3
A
321 325anti-parallel
Strand 4
A
356 358anti-parallel
Strand 5
A
351 353anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
A
309 316anti-parallel
Strand 3
A
363 372anti-parallel
Strand 4
A
375 381anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
386 389first strand
Strand 2
A
425 430anti-parallel
Strand 3
A
445 449anti-parallel
Strand 4
A
452 455anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
386 389first strand
Strand 2
A
425 430anti-parallel
Strand 3
A
466 467anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
416 417first strand
Strand 2
A
472 476anti-parallel
Strand 3
A
481 485anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il