Analysis of interatomic Contacts of Structural Units in PDB entry:
4FF5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FF5 entry

There is 1 chain in PDB entry 4FF5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 15PRO 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 4FF5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 26Right-handed alpha
Helix 2
2
A
39 43Right-handed 310
Helix 3
3
A
44 51Right-handed alpha
Helix 4
4
A
80 90Right-handed alpha
Helix 5
5
A
105 121Right-handed alpha
Helix 6
6
A
122 124Right-handed 310
Helix 7
7
A
139 155Right-handed alpha
Helix 8
8
A
164 171Right-handed alpha
Helix 9
9
A
231 241Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4FF5.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 34first strand
Strand 2
A
54 61parallel
Strand 3
A
95 100parallel
Strand 4
A
128 131parallel
Strand 5
A
159 162parallel
Strand 6
A
180 184parallel
Strand 7
A
205 212parallel
Strand 8
A
221 226anti-parallel
Strand 9
A
31 34anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il