Analysis of interatomic Contacts of Structural Units in PDB entry:
4FGM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FGM entry

There is 1 chain in PDB entry 4FGM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1PRO 587
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 4FGM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 48Right-handed 310
Helix 2
2
A
107 112Right-handed alpha
Helix 3
3
A
159 164Right-handed alpha
Helix 4
4
A
196 216Right-handed alpha
Helix 5
5
A
250 252Right-handed 310
Helix 6
6
A
261 278Right-handed alpha
Helix 7
7
A
286 290Right-handed 310
Helix 8
8
A
302 307Right-handed alpha
Helix 9
9
A
307 321Right-handed alpha
Helix 10
10
A
325 343Right-handed alpha
Helix 11
11
A
344 348Right-handed 310
Helix 12
12
A
350 357Right-handed alpha
Helix 13
13
A
368 373Right-handed alpha
Helix 14
14
A
377 395Right-handed alpha
Helix 15
15
A
400 413Right-handed alpha
Helix 16
16
A
422 430Right-handed alpha
Helix 17
17
A
436 446Right-handed alpha
Helix 18
18
A
452 458Right-handed alpha
Helix 19
19
A
507 513Right-handed alpha
Helix 20
20
A
532 538Right-handed alpha
Helix 21
21
A
577 581Right-handed 310
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There are 7 sheets in PDB entry 4FGM. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
50 57anti-parallel
Strand 3
A
81 88anti-parallel
Strand 4
A
15 22anti-parallel
Strand 5
A
2 10anti-parallel
Strand 6
A
123 127parallel
Strand 7
A
153 157anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 68first strand
Strand 2
A
71 74anti-parallel
Strand 3
A
30 32anti-parallel
Strand 4
A
114 115anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 91first strand
Strand 2
A
97 99anti-parallel
Strand 3
A
103 106anti-parallel
Strand 4
A
168 171anti-parallel
Strand 5
A
137 140anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 180first strand
Strand 2
A
183 190anti-parallel
Strand 3
A
222 230parallel
Strand 4
A
242 248parallel
Strand 5
A
235 238anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 466first strand
Strand 2
A
570 575anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 494first strand
Strand 2
A
497 503anti-parallel
Strand 3
A
519 523anti-parallel
Strand 4
A
526 527anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 494first strand
Strand 2
A
497 503anti-parallel
Strand 3
A
519 523anti-parallel
Strand 4
A
545 552anti-parallel
Strand 5
A
555 562anti-parallel
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