Analysis of interatomic Contacts of Structural Units in PDB entry:
4FGO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FGO entry

There is 1 chain in PDB entry 4FGO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ILE 59GLU 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 4FGO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
60 70Right-handed alpha
Helix 2
2
A
75 90Right-handed alpha
Helix 3
3
A
93 106Right-handed alpha
Helix 4
4
A
125 133Right-handed alpha
Helix 5
5
A
136 151Right-handed alpha
Helix 6
6
A
154 156Right-handed 310
Helix 7
7
A
199 201Right-handed 310
Helix 8
8
A
233 244Right-handed alpha
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There are 2 sheets in PDB entry 4FGO. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
109 110first strand
Strand 2
A
134 135parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
196 197first strand
Strand 2
A
186 188anti-parallel
Strand 3
A
170 177anti-parallel
Strand 4
A
158 165anti-parallel
Strand 5
A
204 211anti-parallel
Strand 6
A
214 217anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il