Analysis of interatomic Contacts of Structural Units in PDB entry:
4FH8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FH8 entry

There are 8 chains in PDB entry 4FH8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0CYS 170
B
 HIS 0CYS 170
C
 MET 1GLU 168
D
 HIS 0CYS 170
E
 MET 1GLY 167
F
 HIS 0VAL 169
G
 MET 1GLY 167
H
 HIS 0VAL 78
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 71 helices in PDB entry 4FH8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 32Right-handed 310
Helix 2
2
A
50 59Right-handed alpha
Helix 3
3
A
59 66Right-handed alpha
Helix 4
4
A
77 86Right-handed alpha
Helix 5
5
A
88 92Right-handed 310
Helix 6
6
A
107 113Right-handed alpha
Helix 7
7
A
149 167Right-handed alpha
Helix 8
8
B
29 32Right-handed 310
Helix 9
9
B
50 59Right-handed alpha
Helix 10
10
B
59 66Right-handed alpha
Helix 11
11
B
77 86Right-handed alpha
Helix 12
12
B
88 92Right-handed 310
Helix 13
13
B
107 113Right-handed alpha
Helix 14
14
B
149 167Right-handed alpha
Helix 15
15
C
29 32Right-handed 310
Helix 16
16
C
50 59Right-handed alpha
Helix 17
17
C
59 66Right-handed alpha
Helix 18
18
C
77 86Right-handed alpha
Helix 19
19
C
88 92Right-handed 310
Helix 20
20
C
107 113Right-handed alpha
Helix 21
21
C
149 167Right-handed alpha
Helix 22
22
D
29 32Right-handed 310
Helix 23
23
D
50 59Right-handed alpha
Helix 24
24
D
59 66Right-handed alpha
Helix 25
25
D
77 86Right-handed alpha
Helix 26
26
D
88 92Right-handed 310
Helix 27
27
D
107 113Right-handed alpha
Helix 28
28
D
149 167Right-handed alpha
Helix 29
29
E
29 32Right-handed 310
Helix 30
30
E
50 59Right-handed alpha
Helix 31
31
E
59 66Right-handed alpha
Helix 32
32
E
77 86Right-handed alpha
Helix 33
33
E
88 92Right-handed 310
Helix 34
34
E
107 113Right-handed alpha
Helix 35
35
E
149 167Right-handed alpha
Helix 36
36
F
29 32Right-handed 310
Helix 37
37
F
50 59Right-handed alpha
Helix 38
38
F
59 66Right-handed alpha
Helix 39
39
F
77 86Right-handed alpha
Helix 40
40
F
88 92Right-handed 310
Helix 41
41
F
107 113Right-handed alpha
Helix 42
42
F
117 121Right-handed 310
Helix 43
43
F
149 167Right-handed alpha
Helix 44
44
G
29 32Right-handed 310
Helix 45
45
G
50 59Right-handed alpha
Helix 46
46
G
59 66Right-handed alpha
Helix 47
47
G
77 86Right-handed alpha
Helix 48
48
G
88 92Right-handed 310
Helix 49
49
G
107 113Right-handed alpha
Helix 50
50
G
149 167Right-handed alpha
Helix 51
51
H
29 32Right-handed 310
Helix 52
52
H
50 59Right-handed alpha
Helix 53
53
H
59 66Right-handed alpha
Helix 54
54
H
77 86Right-handed alpha
Helix 55
55
H
88 92Right-handed 310
Helix 56
56
H
107 113Right-handed alpha
Helix 57
57
H
149 167Right-handed alpha
Helix 58
58
I
29 32Right-handed 310
Helix 59
59
I
50 59Right-handed alpha
Helix 60
60
I
59 66Right-handed alpha
Helix 61
61
I
77 86Right-handed alpha
Helix 62
62
I
88 92Right-handed 310
Helix 63
63
I
107 113Right-handed alpha
Helix 64
64
I
149 167Right-handed alpha
Helix 65
65
J
29 32Right-handed 310
Helix 66
66
J
50 59Right-handed alpha
Helix 67
67
J
59 66Right-handed alpha
Helix 68
68
J
77 86Right-handed alpha
Helix 69
69
J
88 92Right-handed 310
Helix 70
70
J
107 113Right-handed alpha
Helix 71
71
J
149 167Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 4FH8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 14 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 27first strand
Strand 2
A
14 19anti-parallel
Strand 3
A
101 103anti-parallel
Strand 4
A
68 74parallel
Strand 5
A
35 40parallel
Strand 6
A
125 130anti-parallel
Strand 7
A
136 142anti-parallel
Strand 8
B
136 142anti-parallel
Strand 9
B
125 130anti-parallel
Strand 10
B
35 40anti-parallel
Strand 11
B
68 74parallel
Strand 12
B
101 103parallel
Strand 13
B
14 19anti-parallel
Strand 14
B
22 27anti-parallel
Back to list of sheets
Back to top of page

There are 14 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
22 27first strand
Strand 2
C
14 19anti-parallel
Strand 3
C
101 103anti-parallel
Strand 4
C
68 74parallel
Strand 5
C
35 40parallel
Strand 6
C
125 130anti-parallel
Strand 7
C
136 142anti-parallel
Strand 8
D
136 142anti-parallel
Strand 9
D
125 130anti-parallel
Strand 10
D
35 40anti-parallel
Strand 11
D
68 74parallel
Strand 12
D
101 103parallel
Strand 13
D
14 19anti-parallel
Strand 14
D
22 27anti-parallel
Back to list of sheets
Back to top of page

There are 14 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
22 27first strand
Strand 2
E
14 19anti-parallel
Strand 3
E
101 103anti-parallel
Strand 4
E
68 74parallel
Strand 5
E
35 40parallel
Strand 6
E
125 130anti-parallel
Strand 7
E
136 142anti-parallel
Strand 8
F
136 142anti-parallel
Strand 9
F
125 130anti-parallel
Strand 10
F
35 40anti-parallel
Strand 11
F
68 74parallel
Strand 12
F
101 103parallel
Strand 13
F
14 19anti-parallel
Strand 14
F
22 27anti-parallel
Back to list of sheets
Back to top of page

There are 14 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
22 27first strand
Strand 2
G
14 19anti-parallel
Strand 3
G
101 103anti-parallel
Strand 4
G
68 74parallel
Strand 5
G
35 40parallel
Strand 6
G
125 130anti-parallel
Strand 7
G
136 142anti-parallel
Strand 8
H
136 142anti-parallel
Strand 9
H
125 130anti-parallel
Strand 10
H
35 40anti-parallel
Strand 11
H
68 74parallel
Strand 12
H
101 103parallel
Strand 13
H
14 19anti-parallel
Strand 14
H
22 27anti-parallel
Back to list of sheets
Back to top of page

There are 14 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
22 27first strand
Strand 2
I
14 19anti-parallel
Strand 3
I
101 103anti-parallel
Strand 4
I
68 74parallel
Strand 5
I
35 40parallel
Strand 6
I
125 130anti-parallel
Strand 7
I
136 142anti-parallel
Strand 8
J
136 142anti-parallel
Strand 9
J
125 130anti-parallel
Strand 10
J
35 40anti-parallel
Strand 11
J
68 74parallel
Strand 12
J
101 103parallel
Strand 13
J
14 19anti-parallel
Strand 14
J
22 27anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il