Analysis of interatomic Contacts of Structural Units in PDB entry:
4FJS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FJS entry

There are 2 chains in PDB entry 4FJS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 337
B
 ILE 3ALA 317
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 4FJS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 20Right-handed alpha
Helix 2
2
A
22 39Right-handed alpha
Helix 3
3
A
41 47Right-handed 310
Helix 4
4
A
48 58Right-handed alpha
Helix 5
5
A
85 105Right-handed alpha
Helix 6
6
A
120 130Right-handed alpha
Helix 7
7
A
181 190Right-handed alpha
Helix 8
8
A
222 237Right-handed alpha
Helix 9
9
A
238 241Right-handed 310
Helix 10
10
A
244 248Right-handed 310
Helix 11
11
A
270 273Right-handed 310
Helix 12
12
A
275 292Right-handed alpha
Helix 13
13
A
306 320Right-handed alpha
Helix 14
14
A
324 333Right-handed alpha
Helix 15
15
B
4 20Right-handed alpha
Helix 16
16
B
22 39Right-handed alpha
Helix 17
17
B
41 47Right-handed 310
Helix 18
18
B
48 58Right-handed alpha
Helix 19
19
B
85 105Right-handed alpha
Helix 20
20
B
120 130Right-handed alpha
Helix 21
21
B
181 185Right-handed 310
Helix 22
22
B
186 191Right-handed alpha
Helix 23
23
B
210 214Right-handed 310
Helix 24
24
B
222 237Right-handed alpha
Helix 25
25
B
238 241Right-handed 310
Helix 26
26
B
244 248Right-handed 310
Helix 27
27
B
270 273Right-handed 310
Helix 28
28
B
275 292Right-handed alpha
Helix 29
29
B
306 316Right-handed alpha
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There are 7 sheets in PDB entry 4FJS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
321 322anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 73first strand
Strand 2
A
76 80anti-parallel
Strand 3
A
106 114parallel
Strand 4
A
261 268anti-parallel
Strand 5
A
133 138anti-parallel
Strand 6
A
159 164anti-parallel
Strand 7
A
170 175anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 144first strand
Strand 2
A
154 155anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 201first strand
Strand 2
A
216 217anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 73first strand
Strand 2
B
76 84anti-parallel
Strand 3
B
106 114parallel
Strand 4
B
261 268anti-parallel
Strand 5
B
133 138anti-parallel
Strand 6
B
159 164anti-parallel
Strand 7
B
170 175anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 144first strand
Strand 2
B
154 155anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
200 201first strand
Strand 2
B
216 217anti-parallel
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