Analysis of interatomic Contacts of Structural Units in PDB entry:
4FJW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FJW entry

There are 3 chains in PDB entry 4FJW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 MET 1HIS 256
E
 THR 2PHE 254
F
 MET 1THR 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 4FJW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
D
21 25Right-handed 310
Helix 2
2
D
29 45Right-handed alpha
Helix 3
3
D
67 72Right-handed alpha
Helix 4
4
D
74 82Right-handed alpha
Helix 5
5
D
84 86Right-handed 310
Helix 6
6
D
87 92Right-handed alpha
Helix 7
7
D
107 116Right-handed alpha
Helix 8
8
D
130 135Right-handed 310
Helix 9
9
D
141 151Right-handed alpha
Helix 10
10
D
151 162Right-handed alpha
Helix 11
11
D
167 174Right-handed alpha
Helix 12
12
D
181 183Right-handed 310
Helix 13
13
D
184 199Right-handed alpha
Helix 14
14
D
200 213Right-handed alpha
Helix 15
15
D
214 216Right-handed 310
Helix 16
16
D
218 234Right-handed alpha
Helix 17
17
D
236 248Right-handed alpha
Helix 18
18
E
21 25Right-handed 310
Helix 19
19
E
29 46Right-handed alpha
Helix 20
20
E
66 70Right-handed 310
Helix 21
21
E
74 82Right-handed alpha
Helix 22
22
E
84 86Right-handed 310
Helix 23
23
E
87 93Right-handed alpha
Helix 24
24
E
107 116Right-handed alpha
Helix 25
25
E
130 135Right-handed 310
Helix 26
26
E
141 151Right-handed alpha
Helix 27
27
E
151 162Right-handed alpha
Helix 28
28
E
167 173Right-handed alpha
Helix 29
29
E
181 183Right-handed 310
Helix 30
30
E
184 199Right-handed alpha
Helix 31
31
E
200 214Right-handed alpha
Helix 32
32
E
218 234Right-handed alpha
Helix 33
33
E
236 248Right-handed alpha
Helix 34
34
F
21 25Right-handed 310
Helix 35
35
F
29 45Right-handed alpha
Helix 36
36
F
66 71Right-handed alpha
Helix 37
37
F
74 82Right-handed alpha
Helix 38
38
F
84 86Right-handed 310
Helix 39
39
F
87 92Right-handed alpha
Helix 40
40
F
107 116Right-handed alpha
Helix 41
41
F
130 135Right-handed 310
Helix 42
42
F
141 151Right-handed alpha
Helix 43
43
F
151 162Right-handed alpha
Helix 44
44
F
167 173Right-handed alpha
Helix 45
45
F
181 183Right-handed 310
Helix 46
46
F
184 199Right-handed alpha
Helix 47
47
F
200 214Right-handed alpha
Helix 48
48
F
218 234Right-handed alpha
Helix 49
49
F
236 248Right-handed alpha
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There are 6 sheets in PDB entry 4FJW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 11first strand
Strand 2
D
14 19anti-parallel
Strand 3
D
51 55parallel
Strand 4
D
97 101parallel
Strand 5
D
118 122parallel
Strand 6
D
178 180parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
60 62first strand
Strand 2
D
104 106parallel
Strand 3
D
126 128parallel
Strand 4
D
164 166anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
6 11first strand
Strand 2
E
14 19anti-parallel
Strand 3
E
51 55parallel
Strand 4
E
97 101parallel
Strand 5
E
118 122parallel
Strand 6
E
178 180parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
60 63first strand
Strand 2
E
104 106parallel
Strand 3
E
126 128parallel
Strand 4
E
165 166anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
6 11first strand
Strand 2
F
14 19anti-parallel
Strand 3
F
51 55parallel
Strand 4
F
97 101parallel
Strand 5
F
118 122parallel
Strand 6
F
178 180parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
60 63first strand
Strand 2
F
104 106parallel
Strand 3
F
126 128parallel
Strand 4
F
164 166anti-parallel
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