Analysis of interatomic Contacts of Structural Units in PDB entry:
4FMA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FMA entry

There are 4 chains in PDB entry 4FMA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 1ASN 351
B
GLU 1ASN 351
C
GLU 1GLN 350
D
GLU 1PHE 245
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are170 helices in PDB entry 4FMA. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
3 15Right-handed alpha
Helix 2
2
A
22 34Right-handed alpha
Helix 3
3
A
93 97Right-handed 310
Helix 4
4
A
119 131Right-handed alpha
Helix 5
5
A
155 164Right-handed alpha
Helix 6
6
A
177 188Right-handed alpha
Helix 7
7
A
198 205Right-handed alpha
Helix 8
8
A
207 218Right-handed alpha
Helix 9
9
A
221 233Right-handed alpha
Helix 10
10
A
234 244Right-handed alpha
Helix 11
11
A
250 257Right-handed alpha
Helix 12
12
A
257 271Right-handed alpha
Helix 13
13
A
330 338Right-handed alpha
Helix 14
14
B
3 15Right-handed alpha
Helix 15
15
B
22 34Right-handed alpha
Helix 16
16
B
93 97Right-handed 310
Helix 17
17
B
119 131Right-handed alpha
Helix 18
18
B
155 164Right-handed alpha
Helix 19
19
B
177 189Right-handed alpha
Helix 20
20
B
198 205Right-handed alpha
Helix 21
21
B
207 218Right-handed alpha
Helix 22
22
B
221 233Right-handed alpha
Helix 23
23
B
234 244Right-handed alpha
Helix 24
24
B
245 249Right-handed 310
Helix 25
25
B
250 257Right-handed alpha
Helix 26
26
B
257 271Right-handed alpha
Helix 27
27
B
330 338Right-handed alpha
Helix 28
28
C
3 15Right-handed alpha
Helix 29
29
C
22 29Right-handed alpha
Helix 30
30
C
29 34Right-handed alpha
Helix 31
31
C
92 96Right-handed 310
Helix 32
32
C
119 131Right-handed alpha
Helix 33
33
C
155 164Right-handed alpha
Helix 34
34
C
177 188Right-handed alpha
Helix 35
35
C
198 205Right-handed alpha
Helix 36
36
C
207 217Right-handed alpha
Helix 37
37
C
221 233Right-handed alpha
Helix 38
38
C
234 245Right-handed alpha
Helix 39
39
C
246 249Right-handed 310
Helix 40
40
C
250 257Right-handed alpha
Helix 41
41
C
257 270Right-handed alpha
Helix 42
42
C
330 338Right-handed alpha
Helix 43
43
D
3 15Right-handed alpha
Helix 44
44
D
22 34Right-handed alpha
Helix 45
45
D
93 97Right-handed 310
Helix 46
46
D
119 131Right-handed alpha
Helix 47
47
D
155 164Right-handed alpha
Helix 48
48
D
177 188Right-handed alpha
Helix 49
49
D
198 205Right-handed alpha
Helix 50
50
D
207 217Right-handed alpha
Helix 51
51
D
221 233Right-handed alpha
Helix 52
52
D
234 245Right-handed alpha
Helix 53
53
D
246 249Right-handed 310
Helix 54
54
D
250 257Right-handed alpha
Helix 55
55
D
257 268Right-handed alpha
Helix 56
56
D
330 338Right-handed alpha
Helix 57
57
E
3 15Right-handed alpha
Helix 58
58
E
22 29Right-handed alpha
Helix 59
59
E
29 34Right-handed alpha
Helix 60
60
E
92 96Right-handed 310
Helix 61
61
E
119 131Right-handed alpha
Helix 62
62
E
155 164Right-handed alpha
Helix 63
63
E
177 188Right-handed alpha
Helix 64
64
E
198 205Right-handed alpha
Helix 65
65
E
207 218Right-handed alpha
Helix 66
66
E
221 233Right-handed alpha
Helix 67
67
E
234 245Right-handed alpha
Helix 68
68
E
246 249Right-handed 310
Helix 69
69
E
250 257Right-handed alpha
Helix 70
70
E
257 268Right-handed alpha
Helix 71
71
E
330 338Right-handed alpha
Helix 72
72
F
3 15Right-handed alpha
Helix 73
73
F
22 34Right-handed alpha
Helix 74
74
F
93 97Right-handed 310
Helix 75
75
F
119 131Right-handed alpha
Helix 76
76
F
155 164Right-handed alpha
Helix 77
77
F
177 188Right-handed alpha
Helix 78
78
F
198 205Right-handed alpha
Helix 79
79
F
207 218Right-handed alpha
Helix 80
80
F
221 233Right-handed alpha
Helix 81
81
F
234 245Right-handed alpha
Helix 82
82
F
246 249Right-handed 310
Helix 83
83
F
250 257Right-handed alpha
Helix 84
84
F
257 268Right-handed alpha
Helix 85
85
F
330 338Right-handed alpha
Helix 86
86
G
3 15Right-handed alpha
Helix 87
87
G
22 29Right-handed alpha
Helix 88
88
G
29 34Right-handed alpha
Helix 89
89
G
119 131Right-handed alpha
Helix 90
90
G
155 164Right-handed alpha
Helix 91
91
G
177 189Right-handed alpha
Helix 92
92
G
198 205Right-handed alpha
Helix 93
93
G
207 217Right-handed alpha
Helix 94
94
G
221 233Right-handed alpha
Helix 95
95
G
234 244Right-handed alpha
Helix 96
96
G
245 249Right-handed 310
Helix 97
97
G
250 257Right-handed alpha
Helix 98
98
G
257 268Right-handed alpha
Helix 99
99
G
330 338Right-handed alpha
Helix 100
100
H
3 15Right-handed alpha
Helix 101
101
H
22 34Right-handed alpha
Helix 102
102
H
92 96Right-handed 310
Helix 103
103
H
119 131Right-handed alpha
Helix 104
104
H
155 164Right-handed alpha
Helix 105
105
H
177 189Right-handed alpha
Helix 106
106
H
198 205Right-handed alpha
Helix 107
107
H
207 218Right-handed alpha
Helix 108
108
H
221 233Right-handed alpha
Helix 109
109
H
234 245Right-handed alpha
Helix 110
110
H
246 249Right-handed 310
Helix 111
111
H
250 257Right-handed alpha
Helix 112
112
H
257 268Right-handed alpha
Helix 113
113
H
330 338Right-handed alpha
Helix 114
114
I
3 15Right-handed alpha
Helix 115
115
I
22 34Right-handed alpha
Helix 116
116
I
93 97Right-handed 310
Helix 117
117
I
119 131Right-handed alpha
Helix 118
118
I
155 164Right-handed alpha
Helix 119
119
I
177 189Right-handed alpha
Helix 120
120
I
198 205Right-handed alpha
Helix 121
121
I
207 218Right-handed alpha
Helix 122
122
I
221 233Right-handed alpha
Helix 123
123
I
234 244Right-handed alpha
Helix 124
124
I
245 249Right-handed 310
Helix 125
125
I
250 257Right-handed alpha
Helix 126
126
I
257 271Right-handed alpha
Helix 127
127
I
330 338Right-handed alpha
Helix 128
128
J
3 15Right-handed alpha
Helix 129
129
J
22 34Right-handed alpha
Helix 130
130
J
93 97Right-handed 310
Helix 131
131
J
119 131Right-handed alpha
Helix 132
132
J
155 164Right-handed alpha
Helix 133
133
J
177 189Right-handed alpha
Helix 134
134
J
198 205Right-handed alpha
Helix 135
135
J
207 217Right-handed alpha
Helix 136
136
J
221 233Right-handed alpha
Helix 137
137
J
234 244Right-handed alpha
Helix 138
138
J
245 249Right-handed 310
Helix 139
139
J
250 257Right-handed alpha
Helix 140
140
J
257 269Right-handed alpha
Helix 141
141
J
330 338Right-handed alpha
Helix 142
142
K
3 15Right-handed alpha
Helix 143
143
K
22 29Right-handed alpha
Helix 144
144
K
29 34Right-handed alpha
Helix 145
145
K
92 96Right-handed 310
Helix 146
146
K
119 131Right-handed alpha
Helix 147
147
K
155 164Right-handed alpha
Helix 148
148
K
177 189Right-handed alpha
Helix 149
149
K
198 205Right-handed alpha
Helix 150
150
K
207 218Right-handed alpha
Helix 151
151
K
221 233Right-handed alpha
Helix 152
152
K
234 244Right-handed alpha
Helix 153
153
K
245 249Right-handed 310
Helix 154
154
K
250 257Right-handed alpha
Helix 155
155
K
257 268Right-handed alpha
Helix 156
156
K
330 338Right-handed alpha
Helix 157
157
L
3 15Right-handed alpha
Helix 158
158
L
22 34Right-handed alpha
Helix 159
159
L
93 97Right-handed 310
Helix 160
160
L
119 131Right-handed alpha
Helix 161
161
L
155 164Right-handed alpha
Helix 162
162
L
177 188Right-handed alpha
Helix 163
163
L
198 205Right-handed alpha
Helix 164
164
L
207 218Right-handed alpha
Helix 165
165
L
221 233Right-handed alpha
Helix 166
166
L
234 245Right-handed alpha
Helix 167
167
L
246 249Right-handed 310
Helix 168
168
L
250 257Right-handed alpha
Helix 169
169
L
257 266Right-handed alpha
Helix 170
170
L
330 338Right-handed alpha
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There are 35 sheets in PDB entry 4FMA. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
37 39first strand
Strand 2
A
45 52anti-parallel
Strand 3
A
58 64anti-parallel
Strand 4
A
69 74anti-parallel
Strand 5
A
80 85anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
100 101first strand
Strand 2
A
135 137parallel
Strand 3
A
341 348anti-parallel
Strand 4
A
107 110parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
100 101first strand
Strand 2
A
135 137parallel
Strand 3
A
341 348anti-parallel
Strand 4
A
312 323anti-parallel
Strand 5
A
292 303anti-parallel
Strand 6
A
279 286anti-parallel
Strand 7
A
168 171parallel
Strand 8
A
174 175anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
37 39first strand
Strand 2
B
45 52anti-parallel
Strand 3
B
58 64anti-parallel
Strand 4
B
69 75anti-parallel
Strand 5
B
79 85anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
100 101first strand
Strand 2
B
135 137parallel
Strand 3
B
341 348anti-parallel
Strand 4
B
107 110parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
100 101first strand
Strand 2
B
135 137parallel
Strand 3
B
341 348anti-parallel
Strand 4
B
312 323anti-parallel
Strand 5
B
292 303anti-parallel
Strand 6
B
279 286anti-parallel
Strand 7
B
168 171parallel
Strand 8
B
174 175anti-parallel
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There are 10 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
37 39first strand
Strand 2
C
45 52anti-parallel
Strand 3
C
58 64anti-parallel
Strand 4
C
69 74anti-parallel
Strand 5
C
80 85anti-parallel
Strand 6
K
80 85anti-parallel
Strand 7
K
69 74anti-parallel
Strand 8
K
58 64anti-parallel
Strand 9
K
45 52anti-parallel
Strand 10
K
37 39anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
100 101first strand
Strand 2
C
135 137parallel
Strand 3
C
341 348anti-parallel
Strand 4
C
107 110parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
100 101first strand
Strand 2
C
135 137parallel
Strand 3
C
341 348anti-parallel
Strand 4
C
312 323anti-parallel
Strand 5
C
292 303anti-parallel
Strand 6
C
279 286anti-parallel
Strand 7
C
168 171parallel
Strand 8
C
174 175anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
37 39first strand
Strand 2
D
45 52anti-parallel
Strand 3
D
58 64anti-parallel
Strand 4
D
69 74anti-parallel
Strand 5
D
80 85anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
100 101first strand
Strand 2
D
135 137parallel
Strand 3
D
341 348anti-parallel
Strand 4
D
107 110parallel
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There are 8 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
100 101first strand
Strand 2
D
135 137parallel
Strand 3
D
341 348anti-parallel
Strand 4
D
312 323anti-parallel
Strand 5
D
292 303anti-parallel
Strand 6
D
280 286anti-parallel
Strand 7
D
168 171parallel
Strand 8
D
174 175anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
37 39first strand
Strand 2
E
45 52anti-parallel
Strand 3
E
58 64anti-parallel
Strand 4
E
69 74anti-parallel
Strand 5
E
80 85anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
100 101first strand
Strand 2
E
135 137parallel
Strand 3
E
341 348anti-parallel
Strand 4
E
107 110parallel
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There are 8 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
100 101first strand
Strand 2
E
135 137parallel
Strand 3
E
341 348anti-parallel
Strand 4
E
312 323anti-parallel
Strand 5
E
292 303anti-parallel
Strand 6
E
279 286anti-parallel
Strand 7
E
168 171parallel
Strand 8
E
174 175anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
37 39first strand
Strand 2
F
45 52anti-parallel
Strand 3
F
58 64anti-parallel
Strand 4
F
69 74anti-parallel
Strand 5
F
80 85anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
100 101first strand
Strand 2
F
135 137parallel
Strand 3
F
341 348anti-parallel
Strand 4
F
107 110parallel
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There are 8 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
100 101first strand
Strand 2
F
135 137parallel
Strand 3
F
341 348anti-parallel
Strand 4
F
312 323anti-parallel
Strand 5
F
292 303anti-parallel
Strand 6
F
279 286anti-parallel
Strand 7
F
168 171parallel
Strand 8
F
174 175anti-parallel
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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
36 39first strand
Strand 2
G
45 52anti-parallel
Strand 3
G
58 64anti-parallel
Strand 4
G
69 74anti-parallel
Strand 5
G
80 85anti-parallel
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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
100 101first strand
Strand 2
G
135 137parallel
Strand 3
G
341 348anti-parallel
Strand 4
G
107 110parallel
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There are 8 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
100 101first strand
Strand 2
G
135 137parallel
Strand 3
G
341 348anti-parallel
Strand 4
G
312 323anti-parallel
Strand 5
G
292 303anti-parallel
Strand 6
G
279 286anti-parallel
Strand 7
G
168 171parallel
Strand 8
G
174 175anti-parallel
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There are 5 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
37 39first strand
Strand 2
H
45 52anti-parallel
Strand 3
H
58 64anti-parallel
Strand 4
H
69 74anti-parallel
Strand 5
H
80 85anti-parallel
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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
100 101first strand
Strand 2
H
135 137parallel
Strand 3
H
341 348anti-parallel
Strand 4
H
107 110parallel
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There are 8 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
100 101first strand
Strand 2
H
135 137parallel
Strand 3
H
341 348anti-parallel
Strand 4
H
312 323anti-parallel
Strand 5
H
292 303anti-parallel
Strand 6
H
279 286anti-parallel
Strand 7
H
168 171parallel
Strand 8
H
174 175anti-parallel
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There are 5 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
37 39first strand
Strand 2
I
45 52anti-parallel
Strand 3
I
58 64anti-parallel
Strand 4
I
69 75anti-parallel
Strand 5
I
79 85anti-parallel
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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
100 101first strand
Strand 2
I
135 137parallel
Strand 3
I
341 348anti-parallel
Strand 4
I
107 110parallel
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There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
100 101first strand
Strand 2
I
135 137parallel
Strand 3
I
341 348anti-parallel
Strand 4
I
312 323anti-parallel
Strand 5
I
292 303anti-parallel
Strand 6
I
280 286anti-parallel
Strand 7
I
168 171parallel
Strand 8
I
174 175anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
37 39first strand
Strand 2
J
45 52anti-parallel
Strand 3
J
58 64anti-parallel
Strand 4
J
69 74anti-parallel
Strand 5
J
80 85anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
100 101first strand
Strand 2
J
135 137parallel
Strand 3
J
341 348anti-parallel
Strand 4
J
107 110parallel
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There are 8 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
100 101first strand
Strand 2
J
135 137parallel
Strand 3
J
341 348anti-parallel
Strand 4
J
312 323anti-parallel
Strand 5
J
292 303anti-parallel
Strand 6
J
279 286anti-parallel
Strand 7
J
168 171parallel
Strand 8
J
174 175anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
100 101first strand
Strand 2
K
135 137parallel
Strand 3
K
341 348anti-parallel
Strand 4
K
107 110parallel
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There are 8 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
100 101first strand
Strand 2
K
135 137parallel
Strand 3
K
341 348anti-parallel
Strand 4
K
312 323anti-parallel
Strand 5
K
292 303anti-parallel
Strand 6
K
279 286anti-parallel
Strand 7
K
168 171parallel
Strand 8
K
174 176anti-parallel
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There are 5 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
37 39first strand
Strand 2
L
45 52anti-parallel
Strand 3
L
58 64anti-parallel
Strand 4
L
69 74anti-parallel
Strand 5
L
80 85anti-parallel
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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
100 101first strand
Strand 2
L
135 137parallel
Strand 3
L
341 348anti-parallel
Strand 4
L
107 110parallel
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There are 8 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
100 101first strand
Strand 2
L
135 137parallel
Strand 3
L
341 348anti-parallel
Strand 4
L
312 323anti-parallel
Strand 5
L
292 303anti-parallel
Strand 6
L
278 286anti-parallel
Strand 7
L
168 171parallel
Strand 8
L
174 175anti-parallel
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