Analysis of interatomic Contacts of Structural Units in PDB entry:
4FME


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FME entry

There are 6 chains in PDB entry 4FME (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 47ASN 397
B
 PRO 6MET 176
C
 MET 14TYR 173
D
 GLU 47ASN 397
E
 PRO 6MET 176
F
 MET 14TYR 173
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 4FME. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
49 61Right-handed alpha
Helix 2
2
A
69 80Right-handed alpha
Helix 3
3
A
138 142Right-handed 310
Helix 4
4
A
165 177Right-handed alpha
Helix 5
5
A
203 208Right-handed alpha
Helix 6
6
A
223 234Right-handed alpha
Helix 7
7
A
244 251Right-handed alpha
Helix 8
8
A
253 263Right-handed alpha
Helix 9
9
A
267 278Right-handed alpha
Helix 10
10
A
280 291Right-handed alpha
Helix 11
11
A
293 295Right-handed 310
Helix 12
12
A
296 316Right-handed alpha
Helix 13
13
A
378 384Right-handed alpha
Helix 14
14
B
25 33Right-handed alpha
Helix 15
15
B
70 72Right-handed 310
Helix 16
16
B
73 78Right-handed alpha
Helix 17
17
B
79 81Right-handed 310
Helix 18
18
B
95 101Right-handed alpha
Helix 19
19
B
101 113Right-handed alpha
Helix 20
20
B
128 132Right-handed 310
Helix 21
21
B
135 146Right-handed alpha
Helix 22
22
B
162 172Right-handed alpha
Helix 23
23
C
26 36Right-handed alpha
Helix 24
24
C
71 78Right-handed 310
Helix 25
25
C
92 94Right-handed 310
Helix 26
26
C
95 109Right-handed alpha
Helix 27
27
C
110 113Right-handed 310
Helix 28
28
C
131 139Right-handed alpha
Helix 29
29
C
163 172Right-handed alpha
Helix 30
30
D
49 61Right-handed alpha
Helix 31
31
D
69 80Right-handed alpha
Helix 32
32
D
138 142Right-handed 310
Helix 33
33
D
165 177Right-handed alpha
Helix 34
34
D
203 208Right-handed alpha
Helix 35
35
D
223 234Right-handed alpha
Helix 36
36
D
244 251Right-handed alpha
Helix 37
37
D
253 263Right-handed alpha
Helix 38
38
D
267 278Right-handed alpha
Helix 39
39
D
280 291Right-handed alpha
Helix 40
40
D
293 295Right-handed 310
Helix 41
41
D
296 316Right-handed alpha
Helix 42
42
D
378 384Right-handed alpha
Helix 43
43
E
23 33Right-handed alpha
Helix 44
44
E
70 72Right-handed 310
Helix 45
45
E
73 78Right-handed alpha
Helix 46
46
E
79 81Right-handed 310
Helix 47
47
E
95 101Right-handed alpha
Helix 48
48
E
101 113Right-handed alpha
Helix 49
49
E
128 132Right-handed 310
Helix 50
50
E
135 146Right-handed alpha
Helix 51
51
E
162 172Right-handed alpha
Helix 52
52
F
26 36Right-handed alpha
Helix 53
53
F
71 78Right-handed 310
Helix 54
54
F
92 94Right-handed 310
Helix 55
55
F
95 109Right-handed alpha
Helix 56
56
F
110 113Right-handed 310
Helix 57
57
F
131 139Right-handed alpha
Helix 58
58
F
163 172Right-handed alpha
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There are 16 sheets in PDB entry 4FME. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 85first strand
Strand 2
A
91 98anti-parallel
Strand 3
A
104 110anti-parallel
Strand 4
A
115 119anti-parallel
Strand 5
A
127 131anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 147first strand
Strand 2
A
181 183parallel
Strand 3
A
387 394anti-parallel
Strand 4
A
153 156parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 147first strand
Strand 2
A
181 183parallel
Strand 3
A
387 394anti-parallel
Strand 4
A
358 368anti-parallel
Strand 5
A
338 349anti-parallel
Strand 6
A
325 332anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 217first strand
Strand 2
A
220 222anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 49first strand
Strand 2
B
59 67anti-parallel
Strand 3
B
53 54anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 49first strand
Strand 2
B
59 67anti-parallel
Strand 3
B
10 16parallel
Strand 4
B
86 87parallel
Strand 5
B
118 119parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 92first strand
Strand 2
B
122 124parallel
Strand 3
B
151 152parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 54first strand
Strand 2
C
57 64anti-parallel
Strand 3
C
15 19parallel
Strand 4
C
83 89parallel
Strand 5
C
116 122parallel
Strand 6
C
149 153parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
83 85first strand
Strand 2
D
91 98anti-parallel
Strand 3
D
104 110anti-parallel
Strand 4
D
115 119anti-parallel
Strand 5
D
127 131anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
146 147first strand
Strand 2
D
181 183parallel
Strand 3
D
387 394anti-parallel
Strand 4
D
153 156parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
146 147first strand
Strand 2
D
181 183parallel
Strand 3
D
387 394anti-parallel
Strand 4
D
358 368anti-parallel
Strand 5
D
338 349anti-parallel
Strand 6
D
325 332anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
215 217first strand
Strand 2
D
220 222anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
46 49first strand
Strand 2
E
59 67anti-parallel
Strand 3
E
53 54anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
46 49first strand
Strand 2
E
59 67anti-parallel
Strand 3
E
10 16parallel
Strand 4
E
86 87parallel
Strand 5
E
118 119parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
90 92first strand
Strand 2
E
122 124parallel
Strand 3
E
151 152parallel
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There are 6 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
47 54first strand
Strand 2
F
57 64anti-parallel
Strand 3
F
15 19parallel
Strand 4
F
83 89parallel
Strand 5
F
116 122parallel
Strand 6
F
149 153parallel
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