Analysis of interatomic Contacts of Structural Units in PDB entry:
4FMW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FMW entry

There are 2 chains in PDB entry 4FMW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 94ARG 275
B
 ASP 95GLN 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4FMW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
109 113Right-handed 310
Helix 2
2
A
114 135Right-handed alpha
Helix 3
3
A
147 158Right-handed alpha
Helix 4
4
A
159 163Right-handed 310
Helix 5
5
A
173 178Right-handed alpha
Helix 6
6
A
179 181Right-handed 310
Helix 7
7
A
216 226Right-handed alpha
Helix 8
8
A
247 262Right-handed alpha
Helix 9
9
A
263 272Right-handed alpha
Helix 10
10
B
109 113Right-handed 310
Helix 11
11
B
114 134Right-handed alpha
Helix 12
12
B
147 158Right-handed alpha
Helix 13
13
B
159 164Right-handed 310
Helix 14
14
B
173 178Right-handed alpha
Helix 15
15
B
179 181Right-handed 310
Helix 16
16
B
216 225Right-handed alpha
Helix 17
17
B
247 262Right-handed alpha
Helix 18
18
B
263 272Right-handed alpha
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There are 2 sheets in PDB entry 4FMW. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 169first strand
Strand 2
A
140 144parallel
Strand 3
A
102 106parallel
Strand 4
A
202 206parallel
Strand 5
A
183 186parallel
Strand 6
A
228 230parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 169first strand
Strand 2
B
140 144parallel
Strand 3
B
102 106parallel
Strand 4
B
202 206parallel
Strand 5
B
183 186parallel
Strand 6
B
228 230parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il