Analysis of interatomic Contacts of Structural Units in PDB entry:
4FN7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FN7 entry

There are 3 chains in PDB entry 4FN7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 231
B
 MET 1PHE 229
C
 MET 1GLY 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 4FN7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 45Right-handed alpha
Helix 2
2
A
63 70Right-handed alpha
Helix 3
3
A
72 91Right-handed alpha
Helix 4
4
A
106 113Right-handed alpha
Helix 5
5
A
129 134Right-handed 310
Helix 6
6
A
138 149Right-handed alpha
Helix 7
7
A
150 160Right-handed alpha
Helix 8
8
A
165 173Right-handed alpha
Helix 9
9
A
180 182Right-handed 310
Helix 10
10
A
183 196Right-handed alpha
Helix 11
11
A
199 224Right-handed alpha
Helix 12
12
A
224 229Right-handed alpha
Helix 13
13
B
27 45Right-handed alpha
Helix 14
14
B
63 68Right-handed alpha
Helix 15
15
B
73 91Right-handed alpha
Helix 16
16
B
106 113Right-handed alpha
Helix 17
17
B
129 134Right-handed 310
Helix 18
18
B
138 147Right-handed alpha
Helix 19
19
B
150 160Right-handed alpha
Helix 20
20
B
165 173Right-handed alpha
Helix 21
21
B
180 182Right-handed 310
Helix 22
22
B
183 197Right-handed alpha
Helix 23
23
B
199 211Right-handed alpha
Helix 24
24
B
211 224Right-handed alpha
Helix 25
25
C
27 45Right-handed alpha
Helix 26
26
C
63 68Right-handed alpha
Helix 27
27
C
71 91Right-handed alpha
Helix 28
28
C
106 113Right-handed alpha
Helix 29
29
C
129 134Right-handed 310
Helix 30
30
C
138 149Right-handed alpha
Helix 31
31
C
150 160Right-handed alpha
Helix 32
32
C
165 173Right-handed alpha
Helix 33
33
C
180 182Right-handed 310
Helix 34
34
C
183 196Right-handed alpha
Helix 35
35
C
199 211Right-handed alpha
Helix 36
36
C
211 224Right-handed alpha
Helix 37
37
C
224 230Right-handed alpha
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There are 6 sheets in PDB entry 4FN7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 10first strand
Strand 2
A
13 18anti-parallel
Strand 3
A
48 52parallel
Strand 4
A
96 100parallel
Strand 5
A
117 120parallel
Strand 6
A
177 178parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
103 105parallel
Strand 3
A
126 127parallel
Strand 4
A
163 164anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 10first strand
Strand 2
B
13 18anti-parallel
Strand 3
B
48 52parallel
Strand 4
B
96 100parallel
Strand 5
B
117 120parallel
Strand 6
B
177 178parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 59first strand
Strand 2
B
103 105parallel
Strand 3
B
126 127parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 10first strand
Strand 2
C
13 18anti-parallel
Strand 3
C
48 52parallel
Strand 4
C
96 100parallel
Strand 5
C
117 120parallel
Strand 6
C
177 178parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 59first strand
Strand 2
C
103 105parallel
Strand 3
C
126 127parallel
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