Analysis of interatomic Contacts of Structural Units in PDB entry:
4FOI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FOI entry

There are 2 chains in PDB entry 4FOI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 16GLU 914
B
 ASP 16GLU 914
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 77 helices in PDB entry 4FOI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 26Right-handed alpha
Helix 2
2
A
27 30Right-handed 310
Helix 3
3
A
32 52Right-handed alpha
Helix 4
4
A
99 102Right-handed 310
Helix 5
5
A
115 120Right-handed alpha
Helix 6
6
A
122 141Right-handed alpha
Helix 7
7
A
184 195Right-handed alpha
Helix 8
8
A
208 221Right-handed alpha
Helix 9
9
A
243 245Right-handed 310
Helix 10
10
A
260 264Right-handed 310
Helix 11
11
A
275 284Right-handed alpha
Helix 12
12
A
291 296Right-handed alpha
Helix 13
13
A
301 316Right-handed alpha
Helix 14
14
A
325 330Right-handed alpha
Helix 15
15
A
335 342Right-handed alpha
Helix 16
16
A
347 359Right-handed alpha
Helix 17
17
A
364 402Right-handed alpha
Helix 18
18
A
414 420Right-handed alpha
Helix 19
19
A
422 435Right-handed alpha
Helix 20
20
A
449 476Right-handed alpha
Helix 21
21
A
480 500Right-handed alpha
Helix 22
22
A
500 505Right-handed alpha
Helix 23
23
A
563 568Right-handed alpha
Helix 24
24
A
570 589Right-handed alpha
Helix 25
25
A
632 645Right-handed alpha
Helix 26
26
A
656 667Right-handed alpha
Helix 27
27
A
691 693Right-handed 310
Helix 28
28
A
708 712Right-handed 310
Helix 29
29
A
723 732Right-handed alpha
Helix 30
30
A
741 745Right-handed 310
Helix 31
31
A
749 764Right-handed alpha
Helix 32
32
A
767 771Right-handed 310
Helix 33
33
A
774 778Right-handed 310
Helix 34
34
A
783 792Right-handed alpha
Helix 35
35
A
796 806Right-handed alpha
Helix 36
36
A
812 849Right-handed alpha
Helix 37
37
A
862 868Right-handed alpha
Helix 38
38
A
870 883Right-handed alpha
Helix 39
39
A
896 913Right-handed alpha
Helix 40
40
B
17 26Right-handed alpha
Helix 41
41
B
27 30Right-handed 310
Helix 42
42
B
32 52Right-handed alpha
Helix 43
43
B
55 59Right-handed 310
Helix 44
44
B
115 121Right-handed alpha
Helix 45
45
B
122 141Right-handed alpha
Helix 46
46
B
184 197Right-handed alpha
Helix 47
47
B
208 221Right-handed alpha
Helix 48
48
B
243 245Right-handed 310
Helix 49
49
B
260 264Right-handed 310
Helix 50
50
B
275 284Right-handed alpha
Helix 51
51
B
293 297Right-handed 310
Helix 52
52
B
298 316Right-handed alpha
Helix 53
53
B
319 323Right-handed 310
Helix 54
54
B
325 330Right-handed alpha
Helix 55
55
B
335 342Right-handed alpha
Helix 56
56
B
347 359Right-handed alpha
Helix 57
57
B
364 402Right-handed alpha
Helix 58
58
B
414 420Right-handed alpha
Helix 59
59
B
422 435Right-handed alpha
Helix 60
60
B
449 476Right-handed alpha
Helix 61
61
B
480 500Right-handed alpha
Helix 62
62
B
500 505Right-handed alpha
Helix 63
63
B
563 568Right-handed alpha
Helix 64
64
B
570 589Right-handed alpha
Helix 65
65
B
632 645Right-handed alpha
Helix 66
66
B
656 667Right-handed alpha
Helix 67
67
B
708 712Right-handed 310
Helix 68
68
B
723 732Right-handed alpha
Helix 69
69
B
741 745Right-handed 310
Helix 70
70
B
746 764Right-handed alpha
Helix 71
71
B
767 771Right-handed 310
Helix 72
72
B
783 791Right-handed alpha
Helix 73
73
B
796 806Right-handed alpha
Helix 74
74
B
812 849Right-handed alpha
Helix 75
75
B
862 868Right-handed alpha
Helix 76
76
B
870 883Right-handed alpha
Helix 77
77
B
896 914Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 4FOI. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 65first strand
Strand 2
A
254 258anti-parallel
Strand 3
A
234 241anti-parallel
Strand 4
A
224 230anti-parallel
Strand 5
A
406 413parallel
Strand 6
A
438 444parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 112first strand
Strand 2
A
90 98anti-parallel
Strand 3
A
78 85anti-parallel
Strand 4
A
149 154parallel
Strand 5
A
202 207parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
167 168anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 513first strand
Strand 2
A
702 706anti-parallel
Strand 3
A
682 689anti-parallel
Strand 4
A
672 678anti-parallel
Strand 5
A
854 861parallel
Strand 6
A
886 892parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
552 560first strand
Strand 2
A
538 546anti-parallel
Strand 3
A
526 533anti-parallel
Strand 4
A
597 602parallel
Strand 5
A
650 655parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 610first strand
Strand 2
A
613 616anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 65first strand
Strand 2
B
254 258anti-parallel
Strand 3
B
234 241anti-parallel
Strand 4
B
224 230anti-parallel
Strand 5
B
406 413parallel
Strand 6
B
438 444parallel
Back to list of sheets
Back to top of page

There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 112first strand
Strand 2
B
90 97anti-parallel
Strand 3
B
78 85anti-parallel
Strand 4
B
150 154parallel
Strand 5
B
203 207parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 159first strand
Strand 2
B
167 168anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
512 513first strand
Strand 2
B
702 706anti-parallel
Strand 3
B
682 689anti-parallel
Strand 4
B
672 678anti-parallel
Strand 5
B
854 861parallel
Strand 6
B
886 892parallel
Back to list of sheets
Back to top of page

There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
552 560first strand
Strand 2
B
538 546anti-parallel
Strand 3
B
526 533anti-parallel
Strand 4
B
597 602parallel
Strand 5
B
650 655parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
606 610first strand
Strand 2
B
613 616anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il